Gene Information

Name : Entcl_1003 (Entcl_1003)
Accession : YP_003940559.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : lytic transglycosylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 1051093 - 1051530 bp
Length : 438 bp
Strand : +
Note : PFAM: Lytic transglycosylase catalytic; KEGG: kpn:KPN_pKPN4p07123 putative lytic transglycosylase

DNA sequence : 
ATGTTTTTCTTTATTCTTTATTGCAATTCAGTTATCGCGGATTGTTTCGAGAATGCAGGGCGTGATAGTTATATCGACCC
GGATCTTTTACGTGCAATAGCCAGGGTTGAATCAAATTTTGATCATTTAGCTATCGGCAAAAACCCTACAAAGGGATTCG
GCGTTGGGATTATGCAAATTGATTCGCAGCACTTTAGCTACCTGCAAAAATTTGATGTTAGTCCTGAACTGTTGCTGGAT
AAATGTATAAATATTTATGTTGGTACATATTTCTTAAAGCTGGCCATGAACAGAGTTGGGAATAACTGGGATGCAGTCGG
TGCATACAATGCGGGTTTTTCAACCAAGCCGCGACAAATAAAAAAGCGACAGCAGTATGCGAAAAAAGTGCGCAAGCACT
ATCAGATCATAAAGCGAAAAGAAAAACCTGGCATGTGA

Protein sequence : 
MFFFILYCNSVIADCFENAGRDSYIDPDLLRAIARVESNFDHLAIGKNPTKGFGVGIMQIDSQHFSYLQKFDVSPELLLD
KCINIYVGTYFLKLAMNRVGNNWDAVGAYNAGFSTKPRQIKKRQQYAKKVRKHYQIIKRKEKPGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 3e-21 45
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 3e-21 45
unnamed AAC31524.1 L0045 Not tested LEE Protein 2e-21 45
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 3e-21 45
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 2e-21 45
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 7e-22 45
unnamed AAK26704.1 unknown Not tested LEE Protein 5e-21 45
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 7e-21 45
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 7e-21 45
unnamed AAL57531.1 unknown Not tested LEE Protein 4e-21 45
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 4e-21 45
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 4e-21 45
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 6e-12 43
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 3e-16 42
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 3e-16 42
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 4e-16 42
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 4e-16 42
unnamed AAL06358.1 unknown Not tested LEE Protein 9e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_1003 YP_003940559.1 lytic transglycosylase VFG0823 Protein 9e-22 45
Entcl_1003 YP_003940559.1 lytic transglycosylase VFG0719 Protein 1e-21 45
Entcl_1003 YP_003940559.1 lytic transglycosylase VFG0539 Protein 7e-17 42