Gene Information

Name : Entcl_1002 (Entcl_1002)
Accession : YP_003940558.1
Strain : Enterobacter cloacae SCF1
Genome accession: NC_014618
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1050142 - 1051053 bp
Length : 912 bp
Strand : +
Note : KEGG: seh:SeHA_C3064 transcriptional regulator HilD; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain

DNA sequence : 
ATGGGAAACTATTATTTAGCGGAAGTATCTGGTCTTGATTCAATGCAGGTACAACCCAGGAATATTTGCACGCTATCATC
ATCGTGCATAAGCAAACCGCGTGAGGCTATTTTAGTAGATAATCTCTGCGTGACTTCATTTACGTTAGTTTGCATCAGAA
GTGGAAATATAAAAATAACAACTGAAAGCAAACAAATCATTGAATGTGAAGCTCCCGGAATGATTGTTCTTGAAAAGGAA
CAAACAGTAAGTGTGCTCCTCGAAGATATCAATGGGCATCTTTCATTTGAAGTATTAGAAGTACCGCATAATATATTGAT
GAGCACGTACGAGTTGCTGACTGAAAATCTACAAGCTATACCAACAGGGGTAATCAACCATCCGAGGGTGGTTTATACCG
AGGATTTCCCGGCCAGACGCGAGGTATTTGATTCATTAAAAAATAAATTAATTTGTCAAGATAAACAACATTCGCCAGGC
GAGTTCAAAAGCGATAGCATAGATAGTGGCTTAGTTCCTAATTCTTTACTCTTTGTATTATCATTTTTTATTCGCCATCC
GGTGGCGGCAGGAATGTTATCGCGTTCTATAAAAATGAGTGTCAAAGATAAGGTCTATAGTATTATTTACGCAGAACCAG
AAAGACAGTGGAAGTTGGCTGATGTTTCATCAATGATATTTATGAGCGCATCGACACTAAAGAGAAAACTTGCTGTAGAA
GGAACAACTTTCAGTGAGCTTTACCTTACTGCCAGAATGAACTTGGCAACAAAGCTATTGCGCGCTGGAAAACACAGTGT
GAGTACAGTTGCTGTTTTATGCGGTTATGACAGCGTCTCATATTTTATTTATTGCTTTAAAAAAAGATTCAATATTACAC
CATCAGCATTTATGCGTTCGATAAATCATTGA

Protein sequence : 
MGNYYLAEVSGLDSMQVQPRNICTLSSSCISKPREAILVDNLCVTSFTLVCIRSGNIKITTESKQIIECEAPGMIVLEKE
QTVSVLLEDINGHLSFEVLEVPHNILMSTYELLTENLQAIPTGVINHPRVVYTEDFPARREVFDSLKNKLICQDKQHSPG
EFKSDSIDSGLVPNSLLFVLSFFIRHPVAAGMLSRSIKMSVKDKVYSIIYAEPERQWKLADVSSMIFMSASTLKRKLAVE
GTTFSELYLTARMNLATKLLRAGKHSVSTVAVLCGYDSVSYFIYCFKKRFNITPSAFMRSINH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hilD NP_461796.1 invasion protein regulatory protein Virulence SPI-1 Protein 6e-59 49
STY2996 NP_457269.1 AraC-family transcriptional regulator Not tested SPI-1 Protein 7e-58 49
t2777 NP_806478.1 AraC family transcriptional regulator Not tested SPI-1 Protein 7e-58 49
hilD YP_217794.1 regulatory protein Virulence SPI-1 Protein 3e-58 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entcl_1002 YP_003940558.1 AraC family transcriptional regulator VFG0537 Protein 3e-59 49