Gene Information

Name : BBIF_0870 (BBIF_0870)
Accession : YP_003938649.1
Strain : Bifidobacterium bifidum S17
Genome accession: NC_014616
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 1054986 - 1056554 bp
Length : 1569 bp
Strand : +
Note : -

DNA sequence :
TTGGAGAGCTTCGCGACGCGGCTGAGAACCGCCATGAACGCCCGTCACCTCAGACAGGTCGACATCGTGCGTGCCGCCCA
GGCGTCAGGTGTCAAACTCGGCAAAAGCCACATCAGCCAATATGTCAGCGGCAAGACGACGCCCCGCGCGGATACGCTCA
GGTTCCTCGCCGATACACTGCAGGTCGACGAGCAATGGCTGCTCGGCCATGATCGCGGACGGCCCGGCATGCCGGCGCAG
CCGAAACGGGTGCCGGACAATCCCGGCGGCCGAGCCGACGCGCCACGCACGCCATCATCCCAAGCGCCCGCACCCCAGAC
AACGTCACCATCACACGAGCTGGAAGGAACACCCATGCGTCACTTCAACAAATCCACCAAACTTGACAACGTGCTGTACG
ACGTGCGCGGACCGGTCGTCGACGAGGCCGCCCGCATGGAGCAGTCCGGCATGCACGTGCTCAAGCTCAACATCGGCAAT
CCCGCGCCGTTCGGCTTCCGCACGCCGGACGAGGTCGTCTACGACATGTCCCGGCAACTCAGCGACACGGAAGGCTACTC
CGCGTCCAAGGGCCTGTTCTCGGCGCGCAAGGCGATCATGCAGTACGCGCAGCTCAAGAACCTGCCCAATGTCGGCATCG
AAGACATCTACACCGGCAACGGCGTCAGCGAGCTGATCAACCTGTCGTTGTCCGCCCTGCTCGACAACGGCGACGAGGTG
CTGGTGCCCAGCCCCGACTACCCGCTGTGGACCGCCTGCGTCAACCTGGCCGGCGGCACCGCCGTGCACTACGTGTGCGA
CGAGGAATCCGAATGGTACCCGGACATCGACGACATGCGCAGCAAGATTACCGACCGCACCGTCGCCATCGTCCTGATCA
ACCCGAACAATCCGACCGGCGCCCTCTACCCGAAGGAGGTGCTGCAGCAGATCGTCGATCTGGCCCGCGAACACCAGCTG
ATGATCTTCTCCGACGAGATCTACGACCGTCTGGTGATGGACGGTCTCCATCACGTCTCGATCGCGTCCATGGCCCCGGA
CCTGTTCTGTGTCACGTTCTCCGGCCTGTCGAAGTCGCACATGATCGCGGGCTACCGCATCGGATGGATGGTGCTCAGCG
GCAACAAGTCCATCGCGAAGGACTACATCGAGGGCATCAACATGCTCACCAACATGCGCATCTGCTCGAACGTGCCCGCC
CAGTCGATCGTGCAGACCGCCCTCGGCGGCCACCAGAGCGTCAACGACTACATTGTGCCCGGCGGCCGTCTGTACGAGCA
GCGCGAATACATCTACAACGCGTTGAACTCGATTCCCGGCGTCACCGCGGTCAAGCCGAAGGCCGCGTTCTACATCTTCC
CCAAGCTCGACGTGAAGAAGTTCAACATCACTGATGATGAGCAGTTCGCGCTTGACCTGCTGCATGACAAGCGCATCCTC
ATCACGCGCGGCGGCGGGTTCAACTGGCATGAGCCGGACCACTTCCGCATCGTCTACCTGCCGCGCATCGAAGTGCTCAA
GGACGCGACGGAAAAGCTCACCGACTTCCTCAGCTGCTACCGGCAGTAG

Protein sequence :
MESFATRLRTAMNARHLRQVDIVRAAQASGVKLGKSHISQYVSGKTTPRADTLRFLADTLQVDEQWLLGHDRGRPGMPAQ
PKRVPDNPGGRADAPRTPSSQAPAPQTTSPSHELEGTPMRHFNKSTKLDNVLYDVRGPVVDEAARMEQSGMHVLKLNIGN
PAPFGFRTPDEVVYDMSRQLSDTEGYSASKGLFSARKAIMQYAQLKNLPNVGIEDIYTGNGVSELINLSLSALLDNGDEV
LVPSPDYPLWTACVNLAGGTAVHYVCDEESEWYPDIDDMRSKITDRTVAIVLINPNNPTGALYPKEVLQQIVDLAREHQL
MIFSDEIYDRLVMDGLHHVSIASMAPDLFCVTFSGLSKSHMIAGYRIGWMVLSGNKSIAKDYIEGINMLTNMRICSNVPA
QSIVQTALGGHQSVNDYIVPGGRLYEQREYIYNALNSIPGVTAVKPKAAFYIFPKLDVKKFNITDDEQFALDLLHDKRIL
ITRGGGFNWHEPDHFRIVYLPRIEVLKDATEKLTDFLSCYRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-117 54
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-117 54
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-117 54
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-117 54