Gene Information

Name : pyk (BBIF_0777)
Accession : YP_003938556.1
Strain : Bifidobacterium bifidum S17
Genome accession: NC_014616
Putative virulence/resistance : Virulence
Product : Pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 950669 - 952111 bp
Length : 1443 bp
Strand : +
Note : -

DNA sequence :
ATGCGTAAAGCCAAGATCGTAGACACCATCGGTCCTTCCACCGAGTCTCCCGAAGGCATCACCAAGCTGGTTGAGGCCGG
TATGGACGTGGCCCGTCTGAACCGTTCCCACGGCACTCCGGAGGATCACCTCAAGGTCTACAACAACGTGCGCGCGGCCT
CCAAGGCAACCGGTCGTAACGTCGCCGCCATGGTCGATCTCCAGGGCCCGAAGATCCGCTGCGGCTGGTTCAAGAAGAAC
GCCGAGGGCGAGGACAAGGTCCAGCTTGAGGAAGGCCAGGAGTTCATCATCACCACCGACGATGTCGAGGGCGACGAGCA
CATCACCTCCACCACCTTCAAGGGCCTGCCCGGCGACTGCCACCCCGGCGACCCGATCCTGATCGACGACGGCAAGGTCC
GTCTGGAGGTCACCAAGGTCGAGGGCAACAACGTGCACACCAAGGTCGTCGTTGCCGGCCCGGTCTCCTCCCACAAGGGC
ATCAACCTGCCCGGCGTGGCCGTGAGCCTGCCCGCCCTGACCGAGAAGGATGAGGCCGACCTGCGTTGGGCCATCCGCAC
CGGCGCCGACATCATCGCCATGTCCTTCGTGCGTTTCGCCACCGACATCGACCGCGCCCACGAGATCATGGACGAGGAAG
GCCGTCGTATCCCGATCGTCGCCAAGATCGAGAAGCCGCAGGCTCTGGAGAACCTTGAGGACATCGTCAAGACGTTCGAC
GGCGTCATGGCCGCCCGTGGCGACATGGCCGTCGAGTGTCCGCTGGAAGAGGTTCCGCTGGCCACCAAGCGCATCATCGA
GCTGGCCCGTCAGTACGCCAAGCCCGTCATCGTCGCCACCGAGGTCCTGGGCTCCATGGTCCACTCCCCGGTTCCGTCCC
GTGCAGAGGCTTCCGACTGCGCCAACGCCGTGCTTGACGGCGCCGACGCCACGATGACCTCCAACGAGACCGCCGTCGGC
GAGTACCCGACCGAGACCGTCGCCACGATGAGCCGCATCTCCGGCTTCGCCACCGAGCACGGCTTCGACCGCATCCCCGA
GCTGAAGAACCTCGACATGTCCTCCACCGGCGCCGTTTCCTCCGCCGCCGTCGACCTGGCCGAGAAGCTCAACGCCAAGG
CCATCGTCGCCTACACCCAGACCGGCAACACCGTGCACCGTGTGTCCCGCGAGCGTCCGGCCGCCCCGATCTACGGCCTG
ACCACCAACGAGCACACCTACCACTGGCTGGCCCTCTCCTGGGGCACCGAGGCCTTCCTGCTCGATGAGGACTACCACGA
CAAGACCCGCAAGGATCTCATGGCCTTCACCGACAAGGTCCTCAAGAACGCCGGCAAGGTCTCCGACGGCGACAAGATCG
TCGTGCTGAGCTCCGCTCAGGGCGAGCACGCCGCTGGCAGCACCGACACCATCTACGTGCACACCGTCGGTGCCAACGAC
TGA

Protein sequence :
MRKAKIVDTIGPSTESPEGITKLVEAGMDVARLNRSHGTPEDHLKVYNNVRAASKATGRNVAAMVDLQGPKIRCGWFKKN
AEGEDKVQLEEGQEFIITTDDVEGDEHITSTTFKGLPGDCHPGDPILIDDGKVRLEVTKVEGNNVHTKVVVAGPVSSHKG
INLPGVAVSLPALTEKDEADLRWAIRTGADIIAMSFVRFATDIDRAHEIMDEEGRRIPIVAKIEKPQALENLEDIVKTFD
GVMAARGDMAVECPLEEVPLATKRIIELARQYAKPVIVATEVLGSMVHSPVPSRAEASDCANAVLDGADATMTSNETAVG
EYPTETVATMSRISGFATEHGFDRIPELKNLDMSSTGAVSSAAVDLAEKLNAKAIVAYTQTGNTVHRVSRERPAAPIYGL
TTNEHTYHWLALSWGTEAFLLDEDYHDKTRKDLMAFTDKVLKNAGKVSDGDKIVVLSSAQGEHAAGSTDTIYVHTVGAND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-65 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-64 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-65 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_003938556.1 Pyruvate kinase VFG0479 Protein 2e-65 41