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Name : BBIF_0681 (BBIF_0681) Accession : YP_003938460.1 Strain : Bifidobacterium bifidum S17 Genome accession: NC_014616 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 831760 - 834336 bp Length : 2577 bp Strand : + Note : - DNA sequence : ATGTTCGAACGGTTTACCGACCGTGCACGGCGCGTGATCGTGTTGGCGCAGGAAGAGGCGCGTACTCTCCAGCACAACTA CATCGGCACCGAACACCTGCTGCTCGGCCTGATCCGCGAAGGTGAGGGGGTCGCCGCCAAGGCGCTCGCATCCAAGGGAG TGACCTTGGACGACACCCGCAAGCAGGTCGAGGAGATGATCGGCAAAGGCAATGCCGCCCCCAACGGGCACATTCCCTTT ACTCCGCACGCCAAGCAGGTGTTGGAGCTGAGTCTGCGCGAGGCGCTGCAGCTCGGTCACAGCTATATCGGCACCGAGCA CATCCTGCTCGGCCTGATCCGCGAAGGCGAGGGCGTGGGCACCCAGGTGCTCATCAAGATGGATGTCGACCTGGGCGAAC TGCGTTCGGCCACTATCGACATGATCCATGGCAACAGCGGCGGCGCCAATGCCTCCGGCAAGGGCGATCTGGCCAACGCC GGCGGCGTGCAGGACAAGCGCAGCCAGACCGGTTCGGCCATTCTGGACCAGTTCGGGCGCAACCTGACCGCCGAAGCGGC CGAGGGCAAGCTCGACCCGGTGATCGGGCGCACCAACGAGATCGAACGTGTCATGGTCGTGCTGTCGCGCCGCACGAAGA ACAACCCCGTGCTGATCGGCGAGCCGGGCGTCGGCAAGACCGCCGTCGTCGAAGGCCTCGCGCAGAAGATCAACGCCGGC GACGTGCCGGAGACGCTGAAGGACAAGCAGGTCTATTCGCTGGATCTGGGCTCCATGGTGGCCGGCTCGCGCTACCGCGG CGATTTCGAGGAACGCCTCAAGAAGGTGCTCAAGGAGATCAAGACGCGCGGCGACATCGTGCTGTTCATCGACGAGATTC ACACGATCGTCGGTGCCGGTTCGGCGGACGGCGCCTTGGGCGCGTCTGACATGCTCAAGCCCATGCTGGCTCGCGGTGAG CTCCAGACCATCGGCGCCACCACCACCGACGAGTACCGCAAGTACATCGAGAAGGACGCGGCGCTGGAACGTCGTTTCCA GCCGATTCAGGTGCATGAGCCGACAATCGCGGAGACCATCGAAATCCTCAAGGGCCTGCGCTCGCGCTACGAGAACCACC ACCACGTGACCATCACCGACGGCGCGCTGCAGTCCGCCGCGGAGCTGTCGTCCCGCTACATCCAGGACCGCAACCTGCCC GACAAGGCCATCGACCTGATCGACGAGGCCGGCGCGCGGCTGCGCATCAAGCGCCTGACCGCCCCGCCCGAGCTCAAGGA ACTTGACCAGAAGGTCGCGAAGGTCGCCGCCGAGAAGGACAAGGCCATCAAGGACCAGGACTTCGAGAAGGCCGCCGAGC TGCGCGACAACCAGGAGAAGCTGGAAGCGGAGCGCAAGGAGAAGGAATCCTCCTGGCGCGAGGGCGAGTCCGATGTCGAG ATGGTCGTGAACGAGGATGTGATCGCCCAGGTGATCTCCTCGACCACCGGCATTCCGGTGTTCAAGCTCACCCAGGCCGA GTCGAAGAAGCTGCTCGGCATGGAGTCCGAGCTGCACAAGCGCATCATCGGCCAGGACGAAGCGGTTTCCGCGCTGTCCC GTTCGATTCGCCGCACTCGTGTGGGCCTCAAGGATCCGAAGCGTCCTGCGGGCTCGTTCATCTTCGCCGGCCCGACCGGC GTCGGCAAGACCGAGCTGGCCAAGGCGCTGGCCGAGTTCCTGTTCGACGATGAGGACGCGCTGATTCGCGTGGACATGTC GGAGTTCTCCGAGAAGTATGCGGCATCGCGTCTGTTCGGTGCTCCTCCGGGATACGTCGGTTACGAGGAGGGTGGCGAGC TCACCGAGAAGGTGCGCCGCAAGCCGTTCTCCGTCGTACTGTTCGACGAGATCGAGAAGGCCCATCCGGACATCTTCAAC ACGCTGCTGCAGGTGCTGGACGACGGTCACCTGACCGATGGTCAGGGACGCAAGGTGGACTTCAAGAACACCATCATCAT CCTGACCACCAACCTGGGTACGCGCGACATCGCCAAGGCCGCCAACACCGGCTTCAACCTTGGCTCGAACGCGGAGTCCA GCTACCAGCGCATGAAGGATCAGGTCAGCTCCGAACTCAAGCAGCAGTTCCGCCCCGAGTTCCTGAACCGTCTTGACGAC ATCATCGTGTTCCGTCAGCTCACCGAGCCGCAGGTGCGTCAGATTGTCGACCTCGACATCAAGCAGCTCAACGACCGTCT GTTCGACCGTCACATGTCGCTGGAGCTCACCCCGGCCGCCAAGGACCTGCTCGCGCAGAAGGGCTTCGACCCGCTGCTCG GTGCTCGTCCGCTGCGCCGCGTGATCCAGCGCGACATCGAGGACGCCATCTCGGAGAAGATCCTGATGGGCGAACTCGAA GACGGTCAGCGCGTGGTGGTCGACTCCGAAGGCGAGGGCATCCTCGGCGAGTTCACTTTCCGCGGCGAACAGTTCGACGA CGCCAAGCCCGAGAACGAGCCGGCTGCGGAGCCGGCAACGGAGGAGTCAGCTGACAAGTCGGCTGACAACGCCGCTCCCG CCTCGCAGGAGGCCTGA Protein sequence : MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTRKQVEEMIGKGNAAPNGHIPF TPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATIDMIHGNSGGANASGKGDLANA GGVQDKRSQTGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAG DVPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGE LQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDRNLP DKAIDLIDEAGARLRIKRLTAPPELKELDQKVAKVAAEKDKAIKDQDFEKAAELRDNQEKLEAERKEKESSWREGESDVE MVVNEDVIAQVISSTTGIPVFKLTQAESKKLLGMESELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSFIFAGPTG VGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFN TLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAANTGFNLGSNAESSYQRMKDQVSSELKQQFRPEFLNRLDD IIVFRQLTEPQVRQIVDLDIKQLNDRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGELE DGQRVVVDSEGEGILGEFTFRGEQFDDAKPENEPAAEPATEESADKSADNAAPASQEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BBIF_0681 | YP_003938460.1 | ATP-dependent clp protease | VFG0079 | Protein | 0.0 | 57 |
| BBIF_0681 | YP_003938460.1 | ATP-dependent clp protease | VFG0080 | Protein | 2e-136 | 50 |
