Gene Information

Name : BBIF_0595 (BBIF_0595)
Accession : YP_003938374.1
Strain : Bifidobacterium bifidum S17
Genome accession: NC_014616
Putative virulence/resistance : Unknown
Product : peptide/nickel ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 729916 - 731649 bp
Length : 1734 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGACTCGACCAACGTCAAGGACACGTCCGGCAATCTAGCCGAAATCAAGAACCTCAGCGTCTCGTTCATGACCGA
TGCGGGCTCCATCAAGGCCATCGACAAGGTGAACTTCACCATCCCGCGCAAGACCGTGGTCGGCGTGGTCGGCGAATCCG
GCTCCGGCAAGTCGGTGACCGCCCGTTCGATCATCAAGCTGCTGCCCGAGACCGCCACCACGTCCGGTGCGATCTACCTG
TCGAACCGTGCCGACTCCGAACGTCTTGACGTGCTGAGCCTGTCCGGTGAGGATCTGCGCCGCATGCGCGGCTCCGAAGC
GGCCATGGTGTTCCAGGAGCCCAACTCGGTGCTCAACCCGGTGTACACCATCGGCTGGCAGATCGAGGAGGGCCTGCGTG
CCCACGGCATGAAAGACAAGAAGGAGCGCCGGGCGAAGGCCATCGACATCCTCAAGAAGGTCGGCATCCCCGAGGCCGAG
ACCCGCATCGACTACTATCCCCACCAGTTCTCCGGCGGCCAGAAGCAGCGCATCGTCATCGCGATGGCGCTGGTGCTCAA
CCCCGGGCTGATCCTCGCCGACGAGCCGACCACCGCGCTCGATGTGACCGTGCAGGCCGAAATCCTCGACCTGCTGCGTC
TCGCCCGCGACGAGTTCGACGCCTCCGTGCTGATCATCACGCACAACATGGGCGTCATCGCCGACATCGCCGACCAGGTG
GTCGTGATGTACCGCGGCCATGTCGTCGAGCAGGGCGATGTGGAAAGCATCTTCTACCACCCCAGCCATCCCTACACCCA
GCGCCTGCTGGCGGCGGTGCCGCGCATCGGCCAGAAGCTGGTCGTGCGCGATGTCGGCGGCAAGCCGATCGACCGCACGT
CGGATTGGCATGACGAGCCACTGGCCGTCGAGGCGAAGGGACTGACGATCACGTACCCCGGGCACCTGATGCAGCCCGAC
TTCGTGGCCGTAGACGGCATCGACTTCGCGATCCACCGTTCCGAAGTGCTCGGTCTGGTGGGGGAGTCCGGTTCCGGGAA
ATCCACCACCGGCCGCGCGATAGCCGGCCTGCAGAAAGTGAGCGGAGGCTCGCTCAATGTGCTCGGCGTCGAGATGAACG
GCGTCAGAGAGCGTGATTTCAAGCCCAAGCGTGCCGACATCGGATTCGTGTTCCAAGATCCGGGCAGCTCGTTCAACCCG
CTGATGACCATCGCGGAGAACGTCGCCGAACCGCTCATCGTGTACCGCAAGTACTCGTCGGTCGCTGACGCGAAGGAGTA
CGTGGGCGACCTGCTGGAGATGGTGCAGCTGCCGAGGGCGTACATGAGCCGATTCCCGCACGAGCTGTCGGGTGGCCAGC
GGCAACGCGCCTCGCTGGCACGCGCGCTGGCGCTCAAGCCGTCGCTGCTGATCGCCGACGAGCCGACGAGCGCGCTCGAC
GTGTCGGTGCAGGCCAAGGTCCTGGAACTGTTCAAGAAGCTGCAGGTTGAGATCGGATTCGCCTGCCTGTTCATCACCCA
CGATCTGGCCGTGGTGGACATGCTCGCCGACCGTATCATGGTCATGCACAAGGGACGCATCGTCGAGCACGGCGACGCCG
ACGACATCATGCAGCGGCCGAGCAACCAGTACACGAAGAAACTGCTCGCCTCGCTGCCGGTTCCCGACCCGCGCGAACAG
CAGAAGCACCGCGCCCACCTGCACGAGCTCCTGGCCGCCGAAAACGCGGCCTAG

Protein sequence :
MSDSTNVKDTSGNLAEIKNLSVSFMTDAGSIKAIDKVNFTIPRKTVVGVVGESGSGKSVTARSIIKLLPETATTSGAIYL
SNRADSERLDVLSLSGEDLRRMRGSEAAMVFQEPNSVLNPVYTIGWQIEEGLRAHGMKDKKERRAKAIDILKKVGIPEAE
TRIDYYPHQFSGGQKQRIVIAMALVLNPGLILADEPTTALDVTVQAEILDLLRLARDEFDASVLIITHNMGVIADIADQV
VVMYRGHVVEQGDVESIFYHPSHPYTQRLLAAVPRIGQKLVVRDVGGKPIDRTSDWHDEPLAVEAKGLTITYPGHLMQPD
FVAVDGIDFAIHRSEVLGLVGESGSGKSTTGRAIAGLQKVSGGSLNVLGVEMNGVRERDFKPKRADIGFVFQDPGSSFNP
LMTIAENVAEPLIVYRKYSSVADAKEYVGDLLEMVQLPRAYMSRFPHELSGGQRQRASLARALALKPSLLIADEPTSALD
VSVQAKVLELFKKLQVEIGFACLFITHDLAVVDMLADRIMVMHKGRIVEHGDADDIMQRPSNQYTKKLLASLPVPDPREQ
QKHRAHLHELLAAENAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-59 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-59 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-59 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-59 41