Gene Information

Name : smpB (BBIF_0523)
Accession : YP_003938302.1
Strain : Bifidobacterium bifidum S17
Genome accession: NC_014616
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 645485 - 645964 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAGGAACAGGGCACTGTGCTCATCGCACAGAACCGCAAGGCCCGGCATGATTACCTGATCGAGGACAAGTACGA
GGCGGGACTGGTGCTGACCGGGACCGAGGTCAAGTCGCTGCGCGAGGGACGGGCGTCGCTCGCCGAGGCGTTCGTCTCCA
TTGACCGTCGGGGTGAAATGTGGCTGGAAGGTGCCAATATCCCCGAATATCTCAACGGCACGTGGAACAACCATGCGCCC
AAGCGCAAGCGCAAGCTGTTGCTGCATGCGCAGCAGATCGTCAAACTGTCCCGTCAGATCGAGGCCAAGGGGTACACCAT
CGTGCCGCTCAGCCTGTATTTCAAGGATGGTCGGGCGAAGGCCGAGATCGCCCTCGCACGAGGCAAGCGCGAGTTCGACA
AGCGCCAGGCGCTGCGTGAGGAGCAGGACAAGCGCGAGGCGCTGCGTGCCATGCGCTACAAGAACATGCGCTCCCGGTGA

Protein sequence :
MAKEQGTVLIAQNRKARHDYLIEDKYEAGLVLTGTEVKSLREGRASLAEAFVSIDRRGEMWLEGANIPEYLNGTWNNHAP
KRKRKLLLHAQQIVKLSRQIEAKGYTIVPLSLYFKDGRAKAEIALARGKREFDKRQALREEQDKREALRAMRYKNMRSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-32 52
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-34 52
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-18 42