Gene Information

Name : pdxS (BBIF_0383)
Accession : YP_003938162.1
Strain : Bifidobacterium bifidum S17
Genome accession: NC_014616
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 456531 - 457406 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGAAAACCGAGCGGAACTGAACAAGAACCTGGCGCAGATGCTCAAGGGCGGCGTGATCATGGACGTGACGACTCC
CGAGCAGGCTCGGGTCGCCGAGGACGCCGGCGCGTGCGCGGTCATGGCGTTGGAGCGCATCCCCGCTGATATCCGTGCCG
CCGGCGGCGTCTCGCGTATGAGCGACCCGGCCATGATCAAGGGCATTCAGGAGGCCGTCTCCATTCCGGTCATGGCGAAG
GTGCGCATCGGGCACATCGCTGAAGCCCGCATCCTGCAGGCCATCGACATCGACTACATCGACGAGTCCGAAGTGCTTTC
GCCGGCCGATGACGTCTATCACATCGACAAGACACAGTTCGACGTACCGTTCGTGTGCGGTGCGAAGAACCTGGGTGAGG
CGCTGCGCCGCATCGCCGAGGGGGCCGCGATGATTCGCACCAAGGGCGAGCCCGGCACCGGTGACGTGATCCAGGCCGTG
CGTCACATGCGCACGATGAACAAGCAGATTCGCGAGCTCGTCGGCCTGCGTGACGACGAGGTGTTCGAGGCCGCCAAGCA
GCTGGCCGTGCCGGTCGAGCTGGCGCGTTACGTGCACGACAACGGCCGACTGCCGGTCGTGAACTTCGCCGCCGGTGGCG
TGGCCACTCCGGCCGACGCGGCGCTGATGATGGAGCTCGGTGCCGAAGGCGTGTTCGTCGGTTCCGGCATCTTCAAGTCC
GGCGACCCGGCCAAGCGCGCCGCCGCCATCGTCAAGGCCACCGCCAACTGGCAGGATGCCGATCTGCTGGCACGACTCTC
CGAGAACCTCGGCGAGGCCATGGTCGGCATCAACGAGGACGAAATCCAGACCATCATGGCCGCCCGCGGCGAGTGA

Protein sequence :
MAENRAELNKNLAQMLKGGVIMDVTTPEQARVAEDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAK
VRIGHIAEARILQAIDIDYIDESEVLSPADDVYHIDKTQFDVPFVCGAKNLGEALRRIAEGAAMIRTKGEPGTGDVIQAV
RHMRTMNKQIRELVGLRDDEVFEAAKQLAVPVELARYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKS
GDPAKRAAAIVKATANWQDADLLARLSENLGEAMVGINEDEIQTIMAARGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-75 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-75 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-75 67