Gene Information

Name : rph (BBIF_0360)
Accession : YP_003938139.1
Strain : Bifidobacterium bifidum S17
Genome accession: NC_014616
Putative virulence/resistance : Unknown
Product : rph ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 426392 - 427123 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence :
ATGGTGATTCGCGCGGACGGCCGCGTAGTGGACGAACTGCGCCCGGTGCGCATCACGCGGCACTTCACGGACGTGCCCGA
AGGATCGGTACTCATCGAATGCGGCAACACGCGCGTGATGTGCACGGCGACGTTCACGCCGTCGGTGCCGCGCTGGCGCA
AGGATTCCGGACTCGGCTGGGTGACCGCCGAATATTCGATGCTGCCGCGAGCCACCGCCGAGCGCACCGACCGCGAGTCA
GTGCGCGGCAAGGTCGGCGGCCGCACCCATGAGATCAGCCGTCTGATCGGCCGCTGCCTGCGCGGCGTCGTCGACATGAA
GGCGCTTGGCGAGAACCAGATCCAGATCGACTGCGATGTGCTGCAGGCTGATGGCGGCACCCGCACCGCCTCGATCACCG
GCGCGTATGTGGCGCTGGTCGACGCGATGCGCTGGGCTGAGCAGAAGCGCCACATTCGTTCGGCCGACCGCGTGCTCAAA
GACGCCGTTTCCGCGGTGTCGGTCGGCGTTATCAACGGCACGCCGATGCTTGACCTGCCCTACATCGAGGACAGTCAGGC
GATGACCGACATGAACGTGGCGATGACCGGATCCGGTGACTTCATCGAGATCCAGGGCACCGCCGAACACCGCCCGTTCA
ACCGCGCCGAACTCAACACATTGCTCGACCTCGCCGAAAAGGGCAACAAGGAGCTTCAGGCCGCCCAGCGTGCCGCCCTC
TCGCTCGATTGA

Protein sequence :
MVIRADGRVVDELRPVRITRHFTDVPEGSVLIECGNTRVMCTATFTPSVPRWRKDSGLGWVTAEYSMLPRATAERTDRES
VRGKVGGRTHEISRLIGRCLRGVVDMKALGENQIQIDCDVLQADGGTRTASITGAYVALVDAMRWAEQKRHIRSADRVLK
DAVSAVSVGVINGTPMLDLPYIEDSQAMTDMNVAMTGSGDFIEIQGTAEHRPFNRAELNTLLDLAEKGNKELQAAQRAAL
SLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-66 63