|
Name : BBIF_0027 (BBIF_0027) Accession : YP_003937806.1 Strain : Bifidobacterium bifidum S17 Genome accession: NC_014616 Putative virulence/resistance : Virulence Product : PTS system, ascorbate-specific IIC componet Function : - COG functional category : S : Function unknown COG ID : COG3037 EC number : - Position : 31910 - 33427 bp Length : 1518 bp Strand : + Note : - DNA sequence : ATGAACGTTGTCGTTCAAGTGCTGAATTTCATCAGCCAGGAAATACTGAATGTGCCGGCGTATCTGATTGGCATCATCGC GGCCATCGGCCTGATCGCACTGAAGCGCAGCGCCGGGCAGGTCGTGTCGGGCGCCCTGAAGGCGGCCATGGGCTACCTGA TCCTGGGTGCCGGCGCTACCGTCGTCACCTCGGCTTTGGCCCCGTTCGGCGACCTGGTGCTCAAGTCCACCGGCGCGCAC GGCGTCGTGCCCACCAATGAGGTCATCACCGCGCAGGCGTCCAGCCAGTACGGCGCCTCCTCGGCGTACATCATCGTGCT CAGCTTCATCGTGATGCTGCTGCTCGCGCGGTTCACCCCGCTGAAATACATCTTCCTGACCGGCCACCACATGGTGTTCA TGTCCACCATGCTGGCCGTGGTGCTGTCCGTGGGATTCGGCACGGACCACCAGCTGCTCATCGTGATCATCGGCGCCATC CTCATGGGCGTGATCATGGTGGTCATGCCGGCGTTCGCGCAGCCGTTCATGAACAGGGTGACCGGTAGCGACAAGCTGTC GATCGGCCACTTCAACACCCTCGGCTACATTGTCTCCGGTGCTGTCGGCGCCGGCGTGGGCAAGAAGTCGAAGTCCACTG AAGACATCAACTTCCCGAAGGGCCTGAGCTTCCTGCGTGACTCCATGGTCTCCACCACGCTGCTCATGGTCGTGCTGTAC CTGGTCTTCTCCGTGTGGGCCGCCATCGTGCTGCCGGCCAAGGAAGCGTTCAAGATCTTCTCCACCAACCCCGACAACTA CGGTTCGTTCTTCATGGCCGCGTTCGCGCAGGCCCTGCAGTTCGGCATCGGCGTGAGCATCATCCTCTACGGTGTTCGTA TCATCCTCGGTGAACTCGTCCCCGCCTTCCAGGGCATTGCGAACAAGGTCGTGCCCGGCGCCCGCCCGGCGCTGGACATC CCGATCGTGTTCCCGTATGGCGCCAATGCTTCGCTGATCGGCTTCCTCGGCTCTTTCGTCGGTGGCCTGGTGGCTCTGGC GATCATCGCCGTGTGGCTCGGCCCGGTCTGGGGCGTCGCGCTGATCCTGCCCGGCATGGTGCCTCACTTCTTCGATGGTG GTGGTGCTGGTGTGTTCGGCAACGCCACGGGTGGTCGTATCGGTGCCATTGTCGGCTCGTTCATCAACGGCCTGCTGATT ACCTTCCTGCCGGCCGCGCTGATGACCGTGATGGGCAGCTTCGGTCTGGCCAACTCCACCTTCGGTGACGCCGACTTCTG CTGGTTCGGTACGATTACCGGCAACATGGCTCACCTCGGTCCTGTCGGTGGCGCCATCTGCCTGCTGATCTTTGCCGCGG TGCTCTTCGCCGCCGCGTGGATCTGGCAGGTCAAGGTCGTCAACACCGGCTGGACTCCGGGTGCCAAGCACGCCGAGTAC ATCGAGCAGGTGAAGGCCGAGGAGAAGGCCGCCAAGGCCGCTGCTCGCGCCGCCAAGAAGGCCGCTGCGGAAGCGTGA Protein sequence : MNVVVQVLNFISQEILNVPAYLIGIIAAIGLIALKRSAGQVVSGALKAAMGYLILGAGATVVTSALAPFGDLVLKSTGAH GVVPTNEVITAQASSQYGASSAYIIVLSFIVMLLLARFTPLKYIFLTGHHMVFMSTMLAVVLSVGFGTDHQLLIVIIGAI LMGVIMVVMPAFAQPFMNRVTGSDKLSIGHFNTLGYIVSGAVGAGVGKKSKSTEDINFPKGLSFLRDSMVSTTLLMVVLY LVFSVWAAIVLPAKEAFKIFSTNPDNYGSFFMAAFAQALQFGIGVSIILYGVRIILGELVPAFQGIANKVVPGARPALDI PIVFPYGANASLIGFLGSFVGGLVALAIIAVWLGPVWGVALILPGMVPHFFDGGGAGVFGNATGGRIGAIVGSFINGLLI TFLPAALMTVMGSFGLANSTFGDADFCWFGTITGNMAHLGPVGGAICLLIFAAVLFAAAWIWQVKVVNTGWTPGAKHAEY IEQVKAEEKAAKAAARAAKKAAAEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 4e-61 | 46 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 3e-61 | 46 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 3e-61 | 46 |
