Gene Information

Name : nrdE (BBIF_1567)
Accession : YP_003939346.1
Strain : Bifidobacterium bifidum S17
Genome accession: NC_014616
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : -
Position : 1883912 - 1886107 bp
Length : 2196 bp
Strand : +
Note : -

DNA sequence :
ATGACTGACTTCACCGACACCGAGCTGCCGCTCGACAACACCACCGACACCACTGTCGAGCAGTACGATCCGGCGCACGA
CTACCATGCGCTCAACGCGATGCTGAACCTGTACGACGCCGATGGGCGCATCCAGTTCGGTAAGGACAAGGCCGCCGAAC
GCGAATACGTCACCGGCCACGTGGCCACGAACACGAAGCGCTTCGAATCCACCGGCGAGCGCCTGCGCTACCTGATCGAC
CACCAGTATTACGCCCCGGCGGTGTTCGAACGCTACTCCCCCGAGTTCCTGGACGACTTCTACGCGCACGCCGAATCCTC
CGGATTCGAGTTCGGCACGTTCCTGGGCGCGTTCAAGTTCTACACGTCATACGCGCTGAAGACGTTCGACGGCAAACTGT
ATCTGGAGGACTTCCCGCAGCGTTGCGCGGCGGTCGCGCTCGAATTGGCGGCCGGCAGCGAGCAGCGGGCCGTCGAATAC
CTCGACGAGATGCTCTCCGGCGCGTTCCAGCCGGCCACGCCGACGTTCCTGAACCTCGGCAAGGCGCAGCGCGGCGAGGC
GGTCAGCTGCTTCCTCGTGCGCATCGAAGACAGCATGGAGTCGATCTCGCGCGGCATCAACGCGGCCCTGCAGCTGTCGA
AGCGCGGCGGCGGCGTGGCGCTGCTGCTCAGCAATCTTCGCGAGCTCGGCGCCCCGATCAAGCACATCGAGAACCAGTCG
AGCGGCGTGATCCCGGTCATGAAGCTGCTGGAGGACTCGTTCTCGTACGCGAACCAGCTTGGCGCGAGGCAGGGCGCCGG
CGCGGTGTACCTCAATGCGCATCATCCGGACATCCTGCGCTTCCTCGACACGAAGCGCGAGAACGCCGACGAGAAGATTC
GCATCAAATCACTGGCGTTGGGCGTCGTAATCCCGGACGTCACGTTCGAGCTGGCCAAGAAGAAGGCCAAGATGGCGCTG
TTCAGCCCGTATGACGCGGAGCGCGTGTACGGCAAGCCGTTCGCCGACATTTCCGTCACCGAGCATTACGACGAGATGGT
GGCCGACGACCGCATCAGGAAAACCTATATCGACGCGCGCGAGTTCTTCACGACGCTGGCCGAAATCCAGTTCGAATCCG
GCTACCCGTACATCGTGTTCGAGGACACGGTGAACCGCGCGAACCCGATCGCCGGGCGCATCACGATGTCGAACCTGTGC
TCCGAAATCCTGCAGGTGCAGGAGGCGAGCTCCTACAACGAGGACCTGACCTACTCGCACGTCGGGCGCGACGTGTCCTG
CAACCTCGGCTCGCTGAACATCGCCAAGGCGATGGACGCGGGCCTGGCCGGCACCGTCGAGACGGCGATTCGCGCCCTGA
CGTCGGTGTCCGAACACACGCGCATCGACGCGGTGCCCTCGATCCGCCGCGCGAACGATGAAGGGCACGCGATCGGCCTG
GGACAGATGAACCTGCACGGTTTCCTCGCCCGCGAGGGCATCCAGTATGGTTCCGAGGAAGCGCTCGACTTCACCGACAT
GTATTTCATGACGGTCGCCTACCACGCCTACCGCGCCTCGCACGCGCTGGCCGTCGAGCACGGCACGGCGTTTCGCGGTT
TCGCCGATTCGGCGTACGCCAAGCCGGCCGGCGAGGGCAATTATTTCGACAAGTACACCGACGGCCGCCGCTCCCTCGCC
CCGCGCACCGAACTCGTGCGCGCCCTGTTCGAGCGTTTCGGCGTCGCGATCCCGACCGAGGCCGACTGGGCCGAGCTGCG
CGACGACATCCTGCGCGACGGCATCTACAACCAGAACCTGCAGGCCGTGCCGCCCACCGGCTCGATCTCGTACATCAACC
ATTCCACCTCGTCGATCCACCCGATCGCCTCCAAGATCGAGATCCGCAAGGAAGGCAAGCTCGGGCGCGTCTACTACCCG
GCCGCCTACATGACCAACGAGAACCTCGAATACTACAAGGACGCCTACGAAATCGGCTGGAAGGCCATCGTCGACACCTA
CGCCGAAGCCACGCAGCATGTGGACCAGGGACTCTCGCTCACGCTGTTCTTCCCCGACACCGCCACCACCCGCGACCTCA
ACAAGGCCCAGATCTACGCCTGGCGCAAGGGGATCAAGACCCTCTACTACATCCGCATCCGCCAGCAGGCGCTGGAAGGG
ACCGAGGTGCAAGGCTGCGTCTCCTGCACGCTCTGA

Protein sequence :
MTDFTDTELPLDNTTDTTVEQYDPAHDYHALNAMLNLYDADGRIQFGKDKAAEREYVTGHVATNTKRFESTGERLRYLID
HQYYAPAVFERYSPEFLDDFYAHAESSGFEFGTFLGAFKFYTSYALKTFDGKLYLEDFPQRCAAVALELAAGSEQRAVEY
LDEMLSGAFQPATPTFLNLGKAQRGEAVSCFLVRIEDSMESISRGINAALQLSKRGGGVALLLSNLRELGAPIKHIENQS
SGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKSLALGVVIPDVTFELAKKKAKMAL
FSPYDAERVYGKPFADISVTEHYDEMVADDRIRKTYIDAREFFTTLAEIQFESGYPYIVFEDTVNRANPIAGRITMSNLC
SEILQVQEASSYNEDLTYSHVGRDVSCNLGSLNIAKAMDAGLAGTVETAIRALTSVSEHTRIDAVPSIRRANDEGHAIGL
GQMNLHGFLAREGIQYGSEEALDFTDMYFMTVAYHAYRASHALAVEHGTAFRGFADSAYAKPAGEGNYFDKYTDGRRSLA
PRTELVRALFERFGVAIPTEADWAELRDDILRDGIYNQNLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKLGRVYYP
AAYMTNENLEYYKDAYEIGWKAIVDTYAEATQHVDQGLSLTLFFPDTATTRDLNKAQIYAWRKGIKTLYYIRIRQQALEG
TEVQGCVSCTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 70