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Name : lysS (BBIF_1435) Accession : YP_003939214.1 Strain : Bifidobacterium bifidum S17 Genome accession: NC_014616 Putative virulence/resistance : Unknown Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1723764 - 1725455 bp Length : 1692 bp Strand : - Note : - DNA sequence : ATGAGTCAGACGCAAGAAACCCCCGAATCCCTGAACGACGACGAGACGGCGCCCGCTGTTCCCGTCATGACCACGGTCGA ACGTGCCGAGATGCTGCTGCGACAGGACGCAGCCATCCGCGACCGCATCGGCGCCGGCGCAACTTTGGACGAGGCCGTCG ATCCCTCCAACAAGGAGTTCGGCCCGCTCGCGCACCCCGAGCAGGTGCAGATGCGCGTCGCCAAGCGCGCGATGATGCTT GAGGCCGGCATGCAGCCCTACCCGGTGCACCTCGACGTGACCGACACCATCGAGGCCGTGCGCGCCAAGTATGACGGCAA GCTTGAAGCCGGTCAGGAGACCGAGGACGTGGTCGGCATCGCCGGGCGCGTCCTGTTTCTGCGCAACGGCGGCGGCCTGT GCTTCGTGCAGCTGTCGGCCGGCGACGGCACGAAGATCCAGGGCATGATCTCCAAGAAGGAGATCGGCGCTGACTCGCTC AAGCAGTTCAAGCAGCTTGTGGACCTCGGCGACCACCTGTACCTGCGCGGCCGCGTGATCGCGTCCAAGACCGGCGAGCT GTCGGTGTTCGCCACCGAATGGGCCATCGCGTCCAAGGCGCTGCAGCCGCTGCCCGCCCTGCACAAGGACCTGAACGACG ACACGCGCACGCGCAAGCCGTACATCGGCATGATCGCCGATGAGAAGGTGCGCAACATGGTGCGCAACCGGTCCAAGGCC GTCGCCTCGCTGCGCCGCACGTTCGATGACCACGACTTCCTTGAGGTCGAGACGCCGATGCTGCAGACTATCCACGGCGG TGCCGCCGCCCGTCCGTTCACCACGCACATGAACGCCTTCGACCTGGACCTTTATCTGCGCATCGCGCCGGAACTGTTCC TCAAGCGCTGCCTCGTGGGCGGCATCGACCGCGTGTTCGAGATCAACCGCGACTTCCGCAACGAGGGCGTCGACGCCACG CATGCCCCCGAGTTCACGATGGTCGAGGCCTACCAGGCGTACGGCACCTACGACACCATCGGTCAGCTGGTCAAGGAGCT CGTGCAGAAGACCGCGATGGACGTGTTCGGCTCCCATAAGGTCACGCTGCTCGACGGCACCGAATACGATTTCGGCGGCA ACTGGAAGACCATCAGCATGTATGATTCGCTCTCCGAGGCGCTCGGCGAAGAGATCGTGCCGAACGGCGGGCCGGACAAC CCCGGCACTTCCGTGGAGCATCTGGGCGAGATCGCCGACAAGCTCGGCGTGGAGCGTGACGACGTTGAGAACCACGGCAA GCTCGTCGAGCACCTGTGGGAGCACTTCTACGAGGACAAGCTATACGAGCCGACCTTCGTGCGCGACTTCCCGGTCGAGA CCTCCCCGCTGGTCAAGGGCCACCGCAACAAGGCCGGCGTGGTGGAGAAGTGGGACCTCTACGTGCGCGGCTTCGAGCTG GCCACCGGCTACTCCGAGCTCAACGACCCGATCGTGCAGCGCGAGCGTTTCGTGGCCCAGGCCAAGGACGCGCTGGCCGG CGACGAGGAGGCCTGCGACATCGACGAGGACTTCTTGGAGGCCCTCGGCGTGGGCATGCCCCCGGCGGGCGGCATGGGCA TGGGCATCGACCGACTGCTCATCGCCCTGACCGGTGCCACGATCCGCGAGACCATCACCTTCCCTCTGGTCAAGCCGCTG GCGTTGCAGTAA Protein sequence : MSQTQETPESLNDDETAPAVPVMTTVERAEMLLRQDAAIRDRIGAGATLDEAVDPSNKEFGPLAHPEQVQMRVAKRAMML EAGMQPYPVHLDVTDTIEAVRAKYDGKLEAGQETEDVVGIAGRVLFLRNGGGLCFVQLSAGDGTKIQGMISKKEIGADSL KQFKQLVDLGDHLYLRGRVIASKTGELSVFATEWAIASKALQPLPALHKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKA VASLRRTFDDHDFLEVETPMLQTIHGGAAARPFTTHMNAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDAT HAPEFTMVEAYQAYGTYDTIGQLVKELVQKTAMDVFGSHKVTLLDGTEYDFGGNWKTISMYDSLSEALGEEIVPNGGPDN PGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHFYEDKLYEPTFVRDFPVETSPLVKGHRNKAGVVEKWDLYVRGFEL ATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGATIRETITFPLVKPL ALQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-135 | 56 |
