Gene Information

Name : metB (BBIF_1301)
Accession : YP_003939080.1
Strain : Bifidobacterium bifidum S17
Genome accession: NC_014616
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1559026 - 1560213 bp
Length : 1188 bp
Strand : -
Note : -

DNA sequence :
ATGACCATCACCATCTCCACCAACGCCGCAGCCCTCGCCAACACCACGCTCGCCACCCGTGCCATCCACGCCGGGCAGGA
GCCCGACCCGACCACCGGCGCCGTCATCACGCCGATCTACATGACCTCCACGTTCAAGCAGGACGGTGTGGGCGGACTGC
GTAACGGCTACGATTACAGCCGGTCCGTCAACCCCACGCGAAACAGCTTCGACGCGCAGCTCGCCGCCGTCGAAGGCGCG
AAATACGCGCTGAGCTTCTCTTCCGGACTTGCCGCGATTGACGTGCTGCTGCGGGCCACGCTGAAGCCGGGCGACAACAT
CCTGCTCGGCAACGACGTGTACGGCGGCACCTACCGTCTGCTCGCCAAGGTGTTCGTGCCGTGGGGCATCGGGCTCGACG
TGGTCGACATCACCGACACGGCCGCCGTCGCCGCCGCGCTTGAAGCCAAGCAATACCGGTACATCTGGGTGGAGACGCCC
TCCAACCCGCTGCTCAACATCACCGACATCGCCGCGACCGCCGACGTCGCGCATCGGCACGGCACCAAGGTCGTGGTGGA
CAACACGTTCGCTTCCCCGGTGCTGCAGCATCCGCTCGACGACGGTGCCGACGCGGTCGTGTATTCGACCACCAAGTACA
TCGGCGGGCATTCCGATGTGGTCGGCGGCGCGATCGTGCTCAACGACGAAGAAACCCGCGACGCGGTCGCGTTCCTGCAG
AACGCCGCCGGCGCGGTGCCATCTCCGTTCGACTCGTGGCTGGACATCCGCGGCCTGAAGACCCTGGCCGTGCGAGTGCA
GCGCCACAGCGAAAACGCGCTGAAGATCGCGCAATGGCTGGAAACCCGTCCGGAAGTGGAGCGCGTGTGGTACCCGGGAC
TGGAATCCCACCCGGGTCACGAGATTGCCGCCCGTCAGATGCACGGCGGTTTCGGCGGCATGGTTTCCGTGCAGCTCGCG
GCCGGTTTCGAGGCGGCCAAGCGGTTCGCCGGCGCCACGCAGATCTTCACGCTCGCCGAGTCACTGGGTGGAGTGGAGAG
CCTGATCGAGCACCCGGGCGCGATGACCCACGCCTCAGTGGCCGGCACCACGCTGGAGGTGCCCGCGAACCTGGTGCGCC
TGTCCGTCGGCATCGAAGGCGCCGACGACCTGATCGCCGACCTGGAGCAGGCCTTCGCCGCCATCTGA

Protein sequence :
MTITISTNAAALANTTLATRAIHAGQEPDPTTGAVITPIYMTSTFKQDGVGGLRNGYDYSRSVNPTRNSFDAQLAAVEGA
KYALSFSSGLAAIDVLLRATLKPGDNILLGNDVYGGTYRLLAKVFVPWGIGLDVVDITDTAAVAAALEAKQYRYIWVETP
SNPLLNITDIAATADVAHRHGTKVVVDNTFASPVLQHPLDDGADAVVYSTTKYIGGHSDVVGGAIVLNDEETRDAVAFLQ
NAAGAVPSPFDSWLDIRGLKTLAVRVQRHSENALKIAQWLETRPEVERVWYPGLESHPGHEIAARQMHGGFGGMVSVQLA
AGFEAAKRFAGATQIFTLAESLGGVESLIEHPGAMTHASVAGTTLEVPANLVRLSVGIEGADDLIADLEQAFAAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-70 46
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-69 45
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 9e-53 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_003939080.1 cystathionine gamma-synthase BAC0207 Protein 2e-59 43