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Name : lysU (CLOST_0952) Accession : YP_003935982.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Virulence Product : lysine tRNA synthetase, inducible Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1088476 - 1089996 bp Length : 1521 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10913247, 2183178, 2188953, 7735833, 90264318, 91161511, 95020522; Product type e : enzyme DNA sequence : ATGTCTAATGATCAAATGAATTCTGAAACGCTAAGTTTGAACGAGATGCTTCAAATAAGAAGGGACAAGCTGAAGAAGCT TCAAGAAGCTGGTAAAAACCCTTTTAAGATAGAGAAATACATAAAGACTCATCACAGCAAGCAAGTTAAGGACAACTTTG AAAAGTTAGAGGGAAGCGAAGTTTCTCTTGCAGGAAGAATTATGAGTATGAGAGGACATGGCAAGGCTTCTTTTATTGAT ATCCAAGATGAACAAGGAAGAATACAGGTTTATGTAAGACAAGATGCTATAGGTGATGATAGCTACACAGATTTTGTTAC TTATGATATGGGAGACATTATTGGTGTAGAAGGTACAGTGTTTATGACCAATAAAGGGGAGCAATCAGTAAAAGCATCTA AGGTTGCATTACTTACTAAATCTCTTCAAATTTTACCTGAAAAATATCATGGATTAAAAGATCCTGATTTAAGATATAGA CAAAGATATGTGGATTTAATCGTGAATCCAGATGTAAAAGAGGCTTTCTTGATAAGAAGTAAAGCAATAAAGGCATTAAA AGAATATCTAGATGAAAGAGATTTCCTAGAGGTAGATACTCCTATACTATCTACTATAGCAGGAGGAGCAACAGCAAGAC CTTTCATCACTCATCATAATACTCTAGATATTGATATGTATATGCGTATTGCAAATGAGCTATACTTAAAAAGACTTATT GTGGGTGGGTTTGAAAGAGTATATGAGCTAGGAAAAATGTTTAGGAATGAAGGTATGTCAATCAAGCACAACCCTGAGTA TACAGCTATAGAGGTATATCAGGCTTATGCTGATTATGAAGATATAATGAGACTTACTGAAGAAGCTGTAGCTTGCATGG CGCAAAAATCACTTGGAACTACAAAAATAAATTATCAAGGTACAGAAATCGATCTTACTCCTCCGTGGAGAAGACTTAGC ATGATTGATGCAATAAAAGAATTTAAAGGTATAGACTTTAATGAAATTCAAACGGATGAAGAAGCCATTAAAGTTGCAAA AGAAAATCACATTGAAATTACTCCAGTTATGAATAGAGGCTTTGTTATAGCTGCGATGTTTGAAGAGTTCTGTGAGGAGC ATTTAATTCAGCCTACATTTATAACTCATCATCCAGTTGAGGTTTCTCCGCTATCTAAGAGAAATCCAGATGACCCAAGA CTTACAAATAGATTCGAGGCATTTGTAAACACTTGGGAAATTGCAAATGCTTTCTCAGAGCTAAATGATCCTATCGACCA AAGAGAAAGATTTATGGATCAATTGAAGCAAAGAGAGCTAGGAGACGATGAAGCCTATATGCTTGATGAAGACTTCTTAA ATGCAATAGAAGTAGGACTTCCACCAACAGGCGGTCTTGGAATAGGTATTGATAGAGTTATAATGTTACTTACTAACTCG TCATCTATCAGAGATGTAATACTTTTTCCTACAATGAAGCCTATAAAAGAAGAAAAGAATGACGCTAAAGAACAAAACTA A Protein sequence : MSNDQMNSETLSLNEMLQIRRDKLKKLQEAGKNPFKIEKYIKTHHSKQVKDNFEKLEGSEVSLAGRIMSMRGHGKASFID IQDEQGRIQVYVRQDAIGDDSYTDFVTYDMGDIIGVEGTVFMTNKGEQSVKASKVALLTKSLQILPEKYHGLKDPDLRYR QRYVDLIVNPDVKEAFLIRSKAIKALKEYLDERDFLEVDTPILSTIAGGATARPFITHHNTLDIDMYMRIANELYLKRLI VGGFERVYELGKMFRNEGMSIKHNPEYTAIEVYQAYADYEDIMRLTEEAVACMAQKSLGTTKINYQGTEIDLTPPWRRLS MIDAIKEFKGIDFNEIQTDEEAIKVAKENHIEITPVMNRGFVIAAMFEEFCEEHLIQPTFITHHPVEVSPLSKRNPDDPR LTNRFEAFVNTWEIANAFSELNDPIDQRERFMDQLKQRELGDDEAYMLDEDFLNAIEVGLPPTGGLGIGIDRVIMLLTNS SSIRDVILFPTMKPIKEEKNDAKEQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-105 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysU | YP_003935982.1 | lysine tRNA synthetase, inducible | VFG1668 | Protein | 7e-106 | 47 |
