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Name : smpB (CLOST_0657) Accession : YP_003935688.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Unknown Product : trans-translation protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 780815 - 781270 bp Length : 456 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10393194, 12102625, 2045357, 7524073; Product type f : factor DNA sequence : ATGGAAGGTTCGAAAACCGTAGCAACCAATCGAAAAGCAAGATTCAATTACGAAATCATAGAAACGTATGAAGTCGGAAT CGAACTAAAGGGAACAGAAGTAAAATCAATAAGAGCTGGAAAAGTAAACCTAGGAGAGGGCTATGCAAGTGTTGATAACG GAGAGGTTTTTCTAAAGCAAGTGCATATCAGCCCATATGAACAAGGAAATATTTTTAATGTAGACCCTCTTAGAGTAAGA AAGCTTTTACTTCATAAACAGGAGATTAGAAAGCTTATAGGAGAAACTACTCAAAAAGGCTACTCCCTCATACCTCTTTC CATGTATCTTAAGCGTGGGAAAGTTAAAGTACAGCTTGCTCTTGCAAAAGGTAAGAAGAATTACGATAAGAGAGAATCTC TTGCCAAAAAAGATGCTCAGCGCAGGATGGAAAGAGAAATAAAAGACAGATATTAA Protein sequence : MEGSKTVATNRKARFNYEIIETYEVGIELKGTEVKSIRAGKVNLGEGYASVDNGEVFLKQVHISPYEQGNIFNVDPLRVR KLLLHKQEIRKLIGETTQKGYSLIPLSMYLKRGKVKVQLALAKGKKNYDKRESLAKKDAQRRMEREIKDRY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 5e-38 | 57 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 4e-34 | 48 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-26 | 44 |
