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Name : serS (CLOST_0051) Accession : YP_003935086.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 70410 - 71687 bp Length : 1278 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1859832, 3029694, 3062312, 7537870, 90384563, 91296775, 94157910; Product type e : enzyme DNA sequence : ATGTTAGATATTAAAAGAATTAAAAGAGATTTAGAAGAAATCAAACCTTTAATGGCAAAAAGAGGAGAAAAAGATTTTAG CTTTGAAGAGGTAATAGAGCTTGATGACAAGCGTATAGAACTTCTTCAAGAAGTTGAAGCTTTAAAAAATGAGCAAAATG TAGACTCTAAGCTTATTCCTCAGTATAAAAAAGAAGGAAAAAATACAGATGAGCTTATGGCTAGATTAAAAGAGCTATCA GAGCAAATCAAAAATCTAGACGATAAAGTAAAAGAAGTAGAAGAGGACTTATTCCAAAAGCTTCTTAGAATACCAAACGT GCCACATCCAGATGTACCAACTGGAGATACTGACGAAGACAACTTAGAAGTAAGAAAATGGGGAGAGCCAACTGCATTTG ATTTTGAAGCAAAAGCACACTGGGATATAGGAACAGACCTCAATATTCTAGATTTTGAAGCAGCTGGGAAAATCACTGGT TCTAGATTTACATTGTACAAAGATTTAGGAGCTAGATTAGAGCGTTCATTAATCAACTTCTTCCTAAATACACATACAGC TGAGCATGGCTACACAGAGGTACTTCCTCCTTTTATTGCTAACCGTACTAGCTTTATAGGAACGGGACAGCTTCCTAAAT TTGAAGAAGATATGTTCAAACTAGAGGGCTTTGAGTATTTCCTAGTGCCTACAGCAGAGGTTCCAGTTACTAATATTCAC CAAAACGAAATCATGAATGGCGATGATTTAACTACAAAATACTGCGCATACACACCTTGCTTTAGAGCAGAGGCTGGATC TGCTGGAAGAGATACTAGAGGACTTATCCGTCAGCATCAGTTTAACAAAGTAGAGCTAGTTAAATTTACAAAGCCAGAGG ATTCTTACAAAGAGTTAGAAACTCTTACTGCAGATGCAGAAAAAGTGCTTCAGCTACTAGGACTTCCATATAGAGTAGTT CGTATATGCTCAGGGGATTTAGGCTTTACTGCAGCATACAAATATGACCTAGAGGTATGGATGCCTAGCTACAACAGATA CGTAGAGATTTCTTCTTGTTCTAACTTTGAAGATTTCCAAGCTAGAAGAGCAAACATTAGATTCAAAAGAGACAAGGCAT CTAAGCCTGAGTTTGTTCATACTCTTAATGGTTCTGGAGTAGCTATAGGACGTGCTCTTGCCGCTATACTTGAAAACTAT CAGCAAGCTGATGGAACAGTAGTAGTGCCAGAGGTACTTCGCCCATACATGGGAACAGATAAAATAATAAAAAAATAA Protein sequence : MLDIKRIKRDLEEIKPLMAKRGEKDFSFEEVIELDDKRIELLQEVEALKNEQNVDSKLIPQYKKEGKNTDELMARLKELS EQIKNLDDKVKEVEEDLFQKLLRIPNVPHPDVPTGDTDEDNLEVRKWGEPTAFDFEAKAHWDIGTDLNILDFEAAGKITG SRFTLYKDLGARLERSLINFFLNTHTAEHGYTEVLPPFIANRTSFIGTGQLPKFEEDMFKLEGFEYFLVPTAEVPVTNIH QNEIMNGDDLTTKYCAYTPCFRAEAGSAGRDTRGLIRQHQFNKVELVKFTKPEDSYKELETLTADAEKVLQLLGLPYRVV RICSGDLGFTAAYKYDLEVWMPSYNRYVEISSCSNFEDFQARRANIRFKRDKASKPEFVHTLNGSGVAIGRALAAILENY QQADGTVVVPEVLRPYMGTDKIIKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-115 | 56 |
