Gene Information

Name : yknY (CLOST_0452)
Accession : YP_003935487.1
Strain : Clostridium sticklandii DSM 519
Genome accession: NC_014614
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 529996 - 530709 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence : 
ATGCAAACTTCAGTGGAAAGTAAAAACTCAGAAGATGTTTTATTGGAGCTAAAAGAGTTATATAAGATTTATATAATGGG
AAGTGTAGAGGTTCAGGCACTAAGAGGCATCGATTTGACTATAGAAAAAGGTGAGTTTATATCTATAATGGGAACCTCTG
GTTCAGGTAAATCAACTCTAATGAATATAATAGGATGCCTAGACGGACCTACAAAGGGAAACTATTTCTTAGAGGGAATA
GATATTAAGGAAAAATCAGAGGATGAGCTTTCGTTTATAAGAAACCAGAAAATTGGCTTCGTATTTCAGTCGTTTAATTT
AATTGCAAGAACCTCTGCTGTAAAAAATGTAGAGCTACCAATGATATATGCAAAGATGCATGCGAATGACAGACATGAAA
GAGCCAAGCAGTTACTTGAAAAGGTAGGACTTGGAGATAGAATTCACCATATGCCAAATGAGCTCTCAGGTGGGCAAAGA
CAAAGAGTGGCAATAGCTAGAGCTCTTGCCAATGAGCCACCTATAATGCTAGCTGACGAGCCAACTGGAAACCTAGATTC
GAAATCGAGTATAGAGATTATGGAGATATTTAGGAATCTAAATGAAGAAGGTAAAACTGTTATCATAGTTACTCATGAGA
GAGATATAGCTGAGTATACAGATAGGATAGTTACCTTTAAAGATGGACAGATAGTAAGTGATGAAAGAAGGTAA

Protein sequence : 
MQTSVESKNSEDVLLELKELYKIYIMGSVEVQALRGIDLTIEKGEFISIMGTSGSGKSTLMNIIGCLDGPTKGNYFLEGI
DIKEKSEDELSFIRNQKIGFVFQSFNLIARTSAVKNVELPMIYAKMHANDRHERAKQLLEKVGLGDRIHHMPNELSGGQR
QRVAIARALANEPPIMLADEPTGNLDSKSSIEIMEIFRNLNEEGKTVIIVTHERDIAEYTDRIVTFKDGQIVSDERR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yknY YP_003935487.1 ABC transporter NC_012469.1.7686878. Protein 2e-60 54
yknY YP_003935487.1 ABC transporter NC_008702.1.4606598. Protein 1e-44 47
yknY YP_003935487.1 ABC transporter CP001581.1.gene798.p Protein 6e-41 44
yknY YP_003935487.1 ABC transporter CP001581.1.gene598.p Protein 3e-39 42