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Name : yveM (CLOST_0401) Accession : YP_003935436.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Virulence Product : putative capsular polysaccharide biosynthesis protein YveM Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 467487 - 469358 bp Length : 1872 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology DNA sequence : ATGAGGGAGATTTTATCAAATAAATTAATAAGAAAACTAGTACTTCTATTTGCAGATGCTGCACTGGTAAATCTAGCTGC ACTACTTGCCTTAGAGATTAGGTTTGATTTTTATATTACAGGAAGCAATATAGAATATAAAATTGCTTTTATAGATCATT TTGTTATATATACGGGTATTGTGTTGGTGATTTTTTACTTATTTGGACTTTATAGAAGTTTATGGAGATATGCAAGCATT AATGAAATGATGTCGATTGCACTAGCTGCTTTGTGGTCTAATATAGCAACATATATTACTTTTTTACTGCTTGATGTAAA TATGCCTAGAAGCTTTTATATAATAAATATGTTTACTATGGCTGCGTTTGTTGGTGGGCTTAGGTTTTCATATAGAGTGC TTAGACGTATAGAAATGGGAAAGCTACAGACTAATAAACTAAATAGGCCTCTGTCAAAGGTACTTATTATAGGAGCGGGA GAAGCAGGAGTTATGACTGCTAAAGAACTTCTTAGGACTCCAGATATGAATAAGGTTTTAGTTGGATTTGTAGATGACGA TTCAAATAAAATAGGGAAAAAAATAAATGGGATTCCTATTGTAGCTGATATAAGCTCAGGAGTAAAATTTTTAGATGATG TAGATGAGATTATTTTAGCGATGCCTTCTATTACTCATAAGAGAAGAAAAGAAATTATAGAAATATATAAAGACTCTGGT GTGAAAATGAAGATTCTTCCAGGGATATACGAGCTTATAGACGGACAAGTAGATATCAAAAAAATCAGAGACGTGGATAT TGAGGATCTACTAGGAAGAGATTCTATAGCTCTTGATAATACTAAAATAGCAGAAGATATAAAAAACAAAATAGTTATAG TAACTGGAGGGGGAGGCTCTATAGGCTCGGAGCTATGTAGACAGATAGCAGGTTTTTCACCAAAATTACTTATTATATTT GATATATATGAAAACTCAGTATATGATATTCAAAACGAGCTTAAGTCTAAATATCCTACACTTCCCCTAAAAGTGCTTAT AGGCTCTGTAAGGGATGTAAATAGACTAGATGAGATTTTTTTGAAATACAGGCCACAGCTAGTATTTCATGCGGCAGCTC ATAAGCATGTACCACTTATGGAAGATAGCCCTTTTGAAGCTATCAAGAACAATACAGTAGGAACTAAGAATATTTCTGAA ATAGCTGGGAAATATGAAGTTCAAAGATTTGTGCTAATTTCAACTGATAAAGCTGTCAACCCTACAAATATTATGGGAGC TAGTAAAAGACTTGCTGAGCTAGTCATTCAAGATATGAACAAGAAATATTCAACTGAGTATGTAGCAGTTAGATTTGGAA ATGTTCTAGGAAGCAATGGAAGTGTTATTCCGTTATTTAAAAAGCAGATTGAAAAAGGTGGACCTATTACTGTAACTCAT CCTGACATCATAAGATATTTTATGACTATTCCAGAAGCAGTTCAATTAGTGCTTCAAGCGGGCTCTATGGCCAAGGGTGG AGAAATATTTATTCTGGATATGGGAGAGCCTGTTAAAATAGTTGATTTAGCAGAGGATTTAATTAGGCTGTCTGGATTTG AGCCTTATGAGGATATAAATATAGAATTTACTGGGCTTAGACCAGGAGAAAAATTATTTGAAGAGCTACTCCTTGCAGAA GAAGGCATATTAGATACCAAACATGAAAAGATTTTTGTAGGAAAGCCATTTGATAAGGATGATGACTTCACTAGAAAAAG TTTAGAGGGAATTATAGAATCTACATTCGAAGGAAACTATTCTCAGCTAGAGCAAAGAATTAAATTTTTAATACCAAGCT ATAGAGATAAATTAGAACAGAAAAAAGCTTAA Protein sequence : MREILSNKLIRKLVLLFADAALVNLAALLALEIRFDFYITGSNIEYKIAFIDHFVIYTGIVLVIFYLFGLYRSLWRYASI NEMMSIALAALWSNIATYITFLLLDVNMPRSFYIINMFTMAAFVGGLRFSYRVLRRIEMGKLQTNKLNRPLSKVLIIGAG EAGVMTAKELLRTPDMNKVLVGFVDDDSNKIGKKINGIPIVADISSGVKFLDDVDEIILAMPSITHKRRKEIIEIYKDSG VKMKILPGIYELIDGQVDIKKIRDVDIEDLLGRDSIALDNTKIAEDIKNKIVIVTGGGGSIGSELCRQIAGFSPKLLIIF DIYENSVYDIQNELKSKYPTLPLKVLIGSVRDVNRLDEIFLKYRPQLVFHAAAHKHVPLMEDSPFEAIKNNTVGTKNISE IAGKYEVQRFVLISTDKAVNPTNIMGASKRLAELVIQDMNKKYSTEYVAVRFGNVLGSNGSVIPLFKKQIEKGGPITVTH PDIIRYFMTIPEAVQLVLQAGSMAKGGEIFILDMGEPVKIVDLAEDLIRLSGFEPYEDINIEFTGLRPGEKLFEELLLAE EGILDTKHEKIFVGKPFDKDDDFTRKSLEGIIESTFEGNYSQLEQRIKFLIPSYRDKLEQKKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-87 | 46 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-88 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yveM | YP_003935436.1 | putative capsular polysaccharide biosynthesis protein YveM | VFG1300 | Protein | 3e-83 | 45 |
