|
Name : dnaB (CLOST_2564) Accession : YP_003937584.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 2693667 - 2694992 bp Length : 1326 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10404597, 20069637, 6323420, 89123330, 89123331, 93374896, 99389554, 99389555; Product type e : enzyme DNA sequence : ATGGAGGGGAAATTACCGCCTCATTCCATCCAAGCTGAGCAATCAGTTCTTGGAAGTGTTTTAATTGATAGAGAAGCAAT GCTTGTAGTAAGTGATGTACTTCAAGAGGATGATTTTTATAAGGATGCTCACAAAGAGATATTCCACTGCATGATGGATT TGTACAAAAAAAGCGAGCCTATAGACCTTATAACCTTGTCAGAAGGCTTAAAAAAGAGATCATCTCTGGATATGGTAGGA GGAATCACTTATCTTACTGGGCTTTCTACTGCTCCTGACTTTACTCGTCATGTAAGCAAGTATGCAGAAATAGTAAAAGA AAAATCCATACTACGTAAGCTTATAAAAGCATCAGGCTTTATAATGGAGCGAAGCTATGCAGGAGAAGATGAAGTAGCTG ACTTACTAGAACAGGCTGAAAAAAGCATATTTGATATATCACAATCTAAAAGTCAAAAGAGCATGGCGGCTATTTCACAG GTGCTGCTAAGCGCATACGAAATATTGGAAGAGCTGTATAGAAATAAAGGAAGTATTACAGGCCTTACTACTGGCTTTAT AGATTTAGACAGAAAAACCAATGGGCTTCAAAAAACCGATTTAGTGCTTATTGCAGCTAGACCAGCTATGGGAAAAACTG CTTTTGCGTTAAATATTGCTCACAATGCAGCTCTTAAGGATAGCTGTAAAGTAGCTCTATTTTCTATGGAGATGAGTAAA GAACAGCTCATTCAAAGGATGATAGCAGCAGAGAGTAGAGTTGAGCTAAATAAGCTTAAAAATGGAAATCTGGATGAGGA AGAATGGCCAAAGGTCATAACTGCAATGGAAGTTCTTTCCAAGACAGATATTTATATAGATGATACTCCAGGAATAAGCG TAGTAGAGCTAAGGTCAAAATGCAGAAGGCTTAAAATGGAAAAAGGACTAGATATGGTTCTTATCGATTACCTTCAGCTT ATGGAGTCAGATTCAAAAGGAGAAAGTCGTCAGCAAGAAATATCGAAGATATCGCGTTCACTAAAAATATTAGCGAAAGA ATTAGAATGTCCAGTAATAGCTCTATCTCAGCTATCGCGTGCCCCAGAGCAGCGTTCGGATCATAGACCTATACTATCTG ACCTGAGAGAATCAGGAGCAATAGAGCAGGATGCTGACCTTGTGATGTTTCTATACAGAGATGAATACTATCATGAGGAT TCAGACCAAAAAAACATAGCAGAGGTTATTATTGCAAAGCACAGACATGGAGAAACAGGTATGGTTCCTCTGACATGGCT TGGACAGTTCCAGTTATTTCACAATGTAGCCCACATGAGGGAGTAA Protein sequence : MEGKLPPHSIQAEQSVLGSVLIDREAMLVVSDVLQEDDFYKDAHKEIFHCMMDLYKKSEPIDLITLSEGLKKRSSLDMVG GITYLTGLSTAPDFTRHVSKYAEIVKEKSILRKLIKASGFIMERSYAGEDEVADLLEQAEKSIFDISQSKSQKSMAAISQ VLLSAYEILEELYRNKGSITGLTTGFIDLDRKTNGLQKTDLVLIAARPAMGKTAFALNIAHNAALKDSCKVALFSMEMSK EQLIQRMIAAESRVELNKLKNGNLDEEEWPKVITAMEVLSKTDIYIDDTPGISVVELRSKCRRLKMEKGLDMVLIDYLQL MESDSKGESRQQEISKISRSLKILAKELECPVIALSQLSRAPEQRSDHRPILSDLRESGAIEQDADLVMFLYRDEYYHED SDQKNIAEVIIAKHRHGETGMVPLTWLGQFQLFHNVAHMRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 4e-74 | 44 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 8e-78 | 41 |
