Gene Information

Name : CLOST_2416 (CLOST_2416)
Accession : YP_003937437.1
Strain : Clostridium sticklandii DSM 519
Genome accession: NC_014614
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 2546885 - 2547934 bp
Length : 1050 bp
Strand : -
Note : -

DNA sequence :
ATGGAATACTCTAATAATACACCAATATGCAGAAGGAATAAACACTTAAATGAGTTTGAAAGAAGTAAAATTGAAGTTTT
AAGTTCTTTAGGCTACTCGCCTTACCGTATTGCTAAAATGATTAATAGATCTGCTAATACTGTACGTAATGAGATTAAAA
GAGGAACTGTTACTCAAATTAAAGCTGGGAAATCTACATCATCGTATTTCGCTGAAACAGGTCATATCATCTATAAAAGG
AACAGGAAGAATTGCGGTAGCAAATACAAACTGTTTAAATGCCAAAACTTCATCGAGCATGTGTATAAACTCTTTTATGA
AAATAAGCATTCATTTGATTCAATAGTAGGTTCATGCAAGACAAATGAAAGCTTTGCTGCTACTGATATGGTATGTGCTA
AAACACTATACAACTACGTTGATAAAGGTCTTCTTCAAATCTCAAATGTAGATCTTCCATTTAAACTAAAAAGAGATACT
AAAAGTAAGCGTATCAGATTTCATAAAAGGAATCTTGGAACAAGTATCGACCTTAGACCTGAGATCATCAATTCGCGTAG
CGAGTTTGGACACTGGGAGATTGATACTGTCATCGGTAGTAAGAGCAAGGAAGATAATGTGCTTCTTACACTAACTGAAA
GAATGACTAGAAAACAGATTATAAGGATGATACCTTCCAAAACAGCTGACGCTGTTCAGAATAGTCTAAATGAGCTCTTC
ACAGAATGCGGAAGCTTGTATACTAAGGTATTTAAAAGCTTTACTGCTGACAATGGTCAAGAATTTTCAAGGCTTAGTAC
TTTGGAGAAATATTCGAATTTAAGGGTATATTTTGCACATCCTTATTCATCAGGTGAAAGAGGAACGAATGAACGTCATA
ATGGTCTGATAAGAAGGTTCATTCCGAAAGGAAGAAGAATCAAGGATTATACACATAAAAACATCATCAAGGTGCAAAAC
TGGTGCAACTCACTTCCAAGGAAGATACTAAACTATCTTACTCCAGATCGAGCATTTGAAGATCAAATTAGAGAATTATT
TTATCAATAG

Protein sequence :
MEYSNNTPICRRNKHLNEFERSKIEVLSSLGYSPYRIAKMINRSANTVRNEIKRGTVTQIKAGKSTSSYFAETGHIIYKR
NRKNCGSKYKLFKCQNFIEHVYKLFYENKHSFDSIVGSCKTNESFAATDMVCAKTLYNYVDKGLLQISNVDLPFKLKRDT
KSKRIRFHKRNLGTSIDLRPEIINSRSEFGHWEIDTVIGSKSKEDNVLLTLTERMTRKQIIRMIPSKTADAVQNSLNELF
TECGSLYTKVFKSFTADNGQEFSRLSTLEKYSNLRVYFAHPYSSGERGTNERHNGLIRRFIPKGRRIKDYTHKNIIKVQN
WCNSLPRKILNYLTPDRAFEDQIRELFYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 8e-80 53
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 8e-80 53
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 1e-78 52
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 4e-79 52
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 1e-79 52
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 7e-80 52
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 6e-56 51
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 2e-78 51
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 4e-77 51
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 4e-78 51