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Name : yedW (CLOST_2262) Accession : YP_003937284.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Virulence Product : DNA-binding response regulator in two-component system with YedV Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2375589 - 2376284 bp Length : 696 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator DNA sequence : TTGCCTGATAAGAAAATACTAATCATTGAGGACGAATACAATATAGCGAGATTTTTGCAGCTAGAGCTAGAGCATGAGGG TTATGAAGTGGGGATTTCACACGATGGAAGAGAAGGCTTGGACAAAGCGTGCAGCGATTATTTTGACTTGCTGATTTTAG ATGTAATGCTACCTTCTTTGAATGGAGTTGAAGTACTTCGAAGACTCAGGCAAAAATCGGATATGCCTGTAGTCATGCTA ACTGCAAAGGATGAAATGAATGATAAAATTTTAGGCCTTGATATTGGGGCTGATGATTATATGACAAAGCCATTTGCAAT TGAAGAGCTTTTAGCAAGAATAAGAGTTATATTTAAAAGAATGGACAATTACAAAGCTAGCAAACCTCAAAATGATTCTA TATTAAGAATTAAAGGGGTTAATCTAGACATCGACAGATATACTGTAACCTATAAAGAAAAAAATATTGATTTGACTAAA AGAGAATTTGAGCTTTTAAAATATATGATGCAAAATAAAAATCTGGTAATTACAAGAGAAATGATTTTAGCCAAAGTGTG GGGATACGAGTATATGGGAGATACAAATGTAGTGGATGTATATATTCGATATCTACGAAGTAAAATTGACGACCAATTTG GAATCAAGTTAATCCATACTATTAGAGGAGTTGGATATCAAATAAAAGATGAATAA Protein sequence : MPDKKILIIEDEYNIARFLQLELEHEGYEVGISHDGREGLDKACSDYFDLLILDVMLPSLNGVEVLRRLRQKSDMPVVML TAKDEMNDKILGLDIGADDYMTKPFAIEELLARIRVIFKRMDNYKASKPQNDSILRIKGVNLDIDRYTVTYKEKNIDLTK REFELLKYMMQNKNLVITREMILAKVWGYEYMGDTNVVDVYIRYLRSKIDDQFGIKLIHTIRGVGYQIKDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-40 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_007793.3914065.p0 | Protein | 6e-51 | 53 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_002758.1121390.p0 | Protein | 6e-51 | 53 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_010079.5776364.p0 | Protein | 6e-51 | 53 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_002952.2859858.p0 | Protein | 6e-51 | 53 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_007622.3794948.p0 | Protein | 6e-51 | 53 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_003923.1003417.p0 | Protein | 6e-51 | 53 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_013450.8614146.p0 | Protein | 6e-51 | 53 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_002951.3238224.p0 | Protein | 6e-51 | 53 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | AE015929.1.gene1106. | Protein | 5e-45 | 51 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | HE999704.1.gene1528. | Protein | 3e-46 | 51 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | BAC0308 | Protein | 8e-44 | 44 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | BAC0125 | Protein | 2e-41 | 44 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | AE016830.1.gene1681. | Protein | 3e-45 | 44 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | BAC0083 | Protein | 2e-43 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | AF155139.2.orf0.gene | Protein | 3e-36 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_002952.2859905.p0 | Protein | 8e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_007622.3794472.p0 | Protein | 8e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_003923.1003749.p0 | Protein | 5e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_002758.1121668.p0 | Protein | 6e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_009641.5332272.p0 | Protein | 6e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_013450.8614421.p0 | Protein | 6e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_007793.3914279.p0 | Protein | 6e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_002745.1124361.p0 | Protein | 6e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_009782.5559369.p0 | Protein | 6e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_002951.3237708.p0 | Protein | 6e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | BAC0197 | Protein | 8e-42 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | HE999704.1.gene2815. | Protein | 2e-41 | 43 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | NC_012469.1.7685629. | Protein | 4e-38 | 42 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | FJ349556.1.orf0.gene | Protein | 1e-31 | 41 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | BAC0638 | Protein | 2e-39 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | VFG1386 | Protein | 1e-43 | 42 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | VFG0596 | Protein | 5e-41 | 41 |
| yedW | YP_003937284.1 | DNA-binding response regulator in two-component system with YedV | VFG1390 | Protein | 5e-44 | 41 |
