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Name : clpB (CLOST_1982) Accession : YP_003937007.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2115007 - 2117601 bp Length : 2595 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14550559, 14640692, 91294166, 93015925, 93388583, 99428468; Product type f : factor DNA sequence : ATGAACATGGAGAAATTAACTCAAAAGTCTCAAGAAGCCATAGTTCAATCACAAGAAATGGCTTTGAGACTTGGCCATCA GCAGATGGAAACAGAGCATCTGCACTATGCACTGCTTGCAAGCGAGGATAGTCTCATATCCAAGCTACTGACTATGATGG GAAAGAATGTCTCAGCAATTTTAATAGACCTTGGAAATCATCTAGATAAGCTTCCAAAGGTTCAAGGAGAGTCAGTAAGC AGTGTATATCCATCCAGAAGATACAACGAAGTTCTTGTAAAAGCTCAAGACGAAGCTAAAGTATTTCAAGATGAATATAT ATCTGTGGAGCATTTGTATCTTGCTGTTTTAGAGCAAAATCAAGGCTATACTAAAGACATCATCAGCAGATACCATATTG ATAAAAATGAATTTCTTCAGGCTCTAAGCAAGGTGAGGAGTAATCAAAAAATAACTAGCCAAAACCCAGAGGATACCTAT GATGTTCTAAACAAATACGGTAGAGATTTGGTTGAGATGGCTAGAAAAGGCAAGCTCGACCCTGTAATTGGAAGAGATGA AGAAATAAGAAGAGCTATTAGGATTCTATCTAGAAGAACTAAAAACAATCCTGTGCTCATCGGAGAACCTGGAGTAGGTA AAACTGCTGTAGTAGAAGGGCTTGCCCAAAGGATAGTAAATCACGATGTGCCAGAAGGCTTAAAGGATAAGACTATATTT GCACTGGATATGGGAGCCCTCATAGCTGGAGCAAAATACAGAGGAGAGTTTGAAGAAAGGCTCAAAGCTGTACTAAATGA AGTTTCAAAGTCAGAGGGACAAATTATTTTATTTATAGATGAGCTTCACACTATAGTAGGGGCAGGTAAAACTGAAGGTG CAATGGATGCAGGAAACCTCTTAAAGCCTATGCTTGCAAGAGGAGAGCTTCACTGTATAGGAGCTACAACTTTAGATGAA TATCGTAAATATATAGAAAAAGATGCAGCTCTAGAAAGAAGATTTCAGCCAGTTCTAGTAGACCAGCCAGATGTAGAGGA TACCATATCCATATTAAGAGGGATAAAAGAGAAATTTGAAATTCATCATGGAGTTAGAATCACTGACAATGCTATTATTG CCTGCGCAGTGCTGTCAAATAAATACATCTCAGACAGATTCCTGCCAGATAAAGCCATAGACCTTATGGATGAGGCAGCT TCAATGATAAGAACAGAAATTGACAGCATGCCTACGGAGCTGGATGCAATAAGCAGAAAAATCATGCAGATGGAAATAGA GCAGCAAGCGCTTAAAAAAGAAACAGATACATCATCAAAAGCAAGACTAGAAGACCTTCAAAAAGAGCTAGCAATATTAA AAGAGCAGTATAGCTCAATGAAAAGTCAGTGGGAGCTAGAAAAAGAAAATATAATAAAAATAAAAGACCTACAAAAAGAA ATAGAACAAACTAGACATAAGATAGAAGATGCAGAAAGAAGATATGATTTAGAAGAACTAGCTATGCTAAAGCATGGAAA GCTTCCAGAGCTTGAGAAAAAGCTAGAAAGTGAAAGAGAAAATCAAGCAAAAAGTAAAGCCCAGCTATTAAAAGAAGAAG TAACAGAAGACGAAATTGCTGAGATTATATCAAAATGGACAGGAATACCTGTAACAAAGCTAGTAGAAAGCGAAAGAGAA AAACTACTGCATCTTCCTAGCCTTCTTCACAACAGAGTAATAGGACAAGACGAAGCAGTGGACTTAGTAGCTGATGCAGT GCTAAGAGCAAGAGCGGGACTCAAAGACCCAAGAAGACCTATAGGCTCCTTCATATTCTTAGGACCTACAGGTGTAGGAA AGACGGAGCTTGCAAAAGCTTTAGCCCAGGCTCTGTTTGACACTGAAGAGAATATCGTAAGAATAGATATGAGTGAATAT CAGGAAAAGCATACAGTAGCTAGACTTATAGGAGCTCCTCCAGGATATGTAGGCTATGAAGAAGGTGGACAGCTCACTGA AGCGGTAAGAAGAAAGCCATACAGCGTGATATTATTTGACGAGATAGAAAAGGCTCATCCAGAGGTATTCAATACCTTGC TTCAGCTGCTTGATGATGGAAGATTGACAGACTCCAAAGGCAAGACTGTAAACTTCAAAGACACTGTAGTTATTATGACT TCAAATATAGGAAGTAATCTACTTTTAGATGGTATGCAGGAATCTGGGGAAATCTCAGATGCAGTGAAAGAAAACGTACT AAATACACTAAGAGCTAACTTTAAACCAGAGTTTTTGAACAGAATAGATGATATAGTGATGTTCAAACCTCTTACAAAGA GTGAAATAGTAAAAATAGTAGAGCTTAGTCTAGTAGATATTCAAAATAGACTAAGTGATAGAAATATCAAGCTAGAAGTA AGTGATGATGCAAAGAATTTCATTGCAGATAATTCCTACTCAAAAGTATACGGAGCAAGACCAGTAAAAAGGTATCTGCA AAAGCATATAGAAACTCCTATTGCTAGATTGCTAATTCAAGGTGAAGTTCAAGATTATCAGACGATTTATATTGATAAGC ATGAAGCAGACCTATCAATTGGCAGTAAAATCTGA Protein sequence : MNMEKLTQKSQEAIVQSQEMALRLGHQQMETEHLHYALLASEDSLISKLLTMMGKNVSAILIDLGNHLDKLPKVQGESVS SVYPSRRYNEVLVKAQDEAKVFQDEYISVEHLYLAVLEQNQGYTKDIISRYHIDKNEFLQALSKVRSNQKITSQNPEDTY DVLNKYGRDLVEMARKGKLDPVIGRDEEIRRAIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVNHDVPEGLKDKTIF ALDMGALIAGAKYRGEFEERLKAVLNEVSKSEGQIILFIDELHTIVGAGKTEGAMDAGNLLKPMLARGELHCIGATTLDE YRKYIEKDAALERRFQPVLVDQPDVEDTISILRGIKEKFEIHHGVRITDNAIIACAVLSNKYISDRFLPDKAIDLMDEAA SMIRTEIDSMPTELDAISRKIMQMEIEQQALKKETDTSSKARLEDLQKELAILKEQYSSMKSQWELEKENIIKIKDLQKE IEQTRHKIEDAERRYDLEELAMLKHGKLPELEKKLESERENQAKSKAQLLKEEVTEDEIAEIISKWTGIPVTKLVESERE KLLHLPSLLHNRVIGQDEAVDLVADAVLRARAGLKDPRRPIGSFIFLGPTGVGKTELAKALAQALFDTEENIVRIDMSEY QEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPEVFNTLLQLLDDGRLTDSKGKTVNFKDTVVIMT SNIGSNLLLDGMQESGEISDAVKENVLNTLRANFKPEFLNRIDDIVMFKPLTKSEIVKIVELSLVDIQNRLSDRNIKLEV SDDAKNFIADNSYSKVYGARPVKRYLQKHIETPIARLLIQGEVQDYQTIYIDKHEADLSIGSKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-153 | 42 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-107 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003937007.1 | protein disaggregation chaperone | VFG2084 | Protein | 3e-103 | 41 |
