Gene Information

Name : aapP (CLOST_1605)
Accession : YP_003936630.1
Strain : Clostridium sticklandii DSM 519
Genome accession: NC_014614
Putative virulence/resistance : Resistance
Product : amino-acid transporter subunit ; ATP-binding component of ABC superfamily
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 1738076 - 1738798 bp
Length : 723 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence :
GTGATTAAATTAAATAATATCCACAAAAAATTTGGAGATTTACATGTATTAAAAGGAATCGATGAAGAAATTAATAAAGG
CGAAGTATTAGCGATTATTGGACCTAGTGGTTCTGGAAAAAGTACATTGCTAAGATGCATTAATTTTCTTGAACCACCCT
GTGATGGGGATGTTCATTTTGAAGGAAAACTAATAACTAAGGATTCAAAAATATTAAATTCATACAGACAACAAATTGGA
ATGGTATTTCAGCAATTTAACCTTTTTCCAAATAAGACTGTACTTGAAAATATAACTATGGCACCTATACTTCTAAAGAA
GTATTCTACTGAAGAAGCAAATGAAATAGGGCTTGCTTTATTAGAAAGAATAGGCTTATCAGATAAGAAAAATGAGTTTC
CTAGTAAACTCTCTGGAGGGCAAAAACAAAGGGTTGCTATAGCAAGAGCTCTTGCTATGAAGCCAAAAGCTATGCTATTT
GATGAACCAACTTCAGCTCTTGATCCAGAAATGGTGGGAGAAGTGCTTGAGCTTATGAAGAGCCTAGCAAATGAAGATGT
AACTATGATTGTGGTAACGCATGAGATGGGATTTGCCCGTGAAGTTGCAGATAGAGTTCTTTTTATGGATGAGGGAGCAG
TAGTTGAATCTGGAAGCCCAAAAGAAATATTTACTTGTGCTTCTCATCCAAGAACTATTGATTTTTTAAGTAAGGTACTT
TAA

Protein sequence :
MIKLNNIHKKFGDLHVLKGIDEEINKGEVLAIIGPSGSGKSTLLRCINFLEPPCDGDVHFEGKLITKDSKILNSYRQQIG
MVFQQFNLFPNKTVLENITMAPILLKKYSTEEANEIGLALLERIGLSDKKNEFPSKLSGGQKQRVAIARALAMKPKAMLF
DEPTSALDPEMVGEVLELMKSLANEDVTMIVVTHEMGFAREVADRVLFMDEGAVVESGSPKEIFTCASHPRTIDFLSKVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 1e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aapP YP_003936630.1 amino-acid transporter subunit ; ATP-binding component of ABC superfamily NC_008702.1.4606598. Protein 8e-26 41