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Name : clpB (CLOST_0160) Accession : YP_003935195.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 183842 - 186307 bp Length : 2466 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14550559, 14640692, 91294166, 93015925, 93388583, 99428468; Product type f : factor DNA sequence : ATGATGGAGAATTTTACAGAAAGAGCAAAGCAAGCCATAGAGCTTGCAAAGAGGGAAGCTAGCAAGCTAGGTCATAATAT TGCTGGCAGTGAGCATATTCTTTTGGGACTGATGGCTGAAGGACAAGGAATAGCTTATCAAGTGCTATACAAATTTGGTC TTACGCTTGAATCACTAGTAAGAGAAATAATAGATTTAGAGGGTATTGGACTTCCAAATACTCACTTTCAAGGCTTTAGC CCTAGAACTAAAGGGATTTTTGAGCTGAGTATAATGGAAGCAAAAATGCTAGGCCATAGCTATATAGGTACTGAGCATTT ACTTCTAGCCTTGCTAAAGGAAAAAGAGTGCATAGGATGCAGGCTTCTAATGGAAAAAGGTATAGACTATAATCTGGTAT TTAAAGAGATTATGAATCTTCTTGGAGGAAGCAGTGCAGGCAAAGAGCCTAATCAAGCAGGAAATACAAGCTCTATGAAT AGTCAAAATCCAAACACCCCTACACTTAACCAGTACGGTGTGGATTTGACCAAAGAAGCTGATGAAAACAGACTTGACCC TGTAATAGGTAGAAGTAAAGAAATAGAAAGAATAATTCAAATTTTAAGTAGAAGAACTAAGAATAACCCTGTCCTTATAG GCGACCCGGGTGTAGGAAAGACAGCTATAATAGAAGGACTAGCTCAAAAAATAAACTCGGGAGATATCCCATCTACCCTT AAAAACAAGCGTATTATGACTCTCGAAATGGGAAACCTTCTTGCAGGAGCTAAGTACAGAGGCGAGTTTGAAGAGAGAGT TAAAAAAATAGTAGAGGAATTAAAAGCAAATAAAGATGTGATTATATTTATAGATGAAATCCACAATCTAGCAGGAGCCG GTGGAGCTGAAGGTGCTATAGATGCATCAAATATCATGAAGCCTGCACTAGCTAGAGGTGAAATCCAGGTTATGGGAGCT ACTACTATAGATGAATACAGAAAGCACATAGAAAAGGATTCTGCTCTAGAGAGAAGATTCCAGACAGTAATGGTAGATGA GCCTAACACTGAGGATTCTATAAAAATACTTCACGGCCTTAGAGATAGATATGAAGCTCACCATAAGGTAAAGATTACTG ATGAAGCAATAAAGGCGGCCGTTGATTTATCGCATAGATATATCACTGATAGATTTTTGCCTGACAAAGCTATAGATTTA ATAGATGAAGCAGCTTCTAGAGTAAGGCTTAGAAAATATATGGAGCCTGATAATATCAAGGAGCTAGAGGATAAACTATC CAAGCTTTCTATGGAAAAGGAAGAAGCAATAGCTACTCAGGATTTTGAAAAGGCTGCTAAAATTAGAGATGAAGAAAAGC AAATCAAAGAGCAGCTAGGCGAAAATAAAGAGCAGTGGACTAAGAAAAACTATACTAGCACTGAAGTAGTATTAGAAAAG GACATAGCTGAAATAGTATCTTCATGGACAGGAGTTCCAGTTACTAGACTTCAAATGGAAGAATCTACTAAGCTTTTGGA TTTAGAAAATATACTTCACAAAAGAGTTATAGGTCAAGAAGAAGCAGTAGAAGCTATATCAAGAGCCATAAGAAGAGCTA GAACAGGTATGAAGGATCCAAAGAGACCTATAGGCTCATTTATATTCCTAGGGCCTACAGGAGTAGGAAAAACTGAGCTT TCAAAGGCTTTAGCAGAAGCTATGTTTGAAGATGAGGATTCTATAGTTAGAATAGATATGAGTGAGTATATGGAAAAGCA TTCTGTATCAAAACTCATAGGCTCTCCTCCAGGATATGTAGGCTATGATGAAGGCGGGCAGCTTACGGAAAAAATCAGAA GAAAGCCATATTCTGTGGTATTATTTGATGAGATAGAAAAAGCTCATCCAGATGTATTTAATATGCTGCTTCAGATTCTA GACGATGGAAGACTTACAGATTCTAAAGGACGTACTGTGGATTTCAAAAATACAGTGCTCATCATGACTTCAAACGTAGG TGCAACTACTATCCAAAAGCAAAAGACTCTTGGATTTAGCACTGTAACAGATGAAGAAAAGAAAGAAAAAGCAGCTTACG AAAAGATGAAGGACAATGTTATGGTTGAGCTTAAGAGAAGCTTTAAACCAGAGTTTCTAAATCGTGTAGACGATATTATA GTATTCCATGCGCTTACAGATAGAGAGCTTGAAAAAATCGTATATCTAATGATATCAAATCTGGAAAAACGTCTTATGGA TAAAAATATTACTATAGAGCTAGATGAGGCTGCAATGAAGCTCATCACTAAAAATGGCTATGATTTAGAGTTTGGCGCAA GACCTCTAAAGCGTGCTATTCAAAGACTGCTTGAAGATGAAATCTCTGAAAAGCTTTTAAGAGGAGAAATAAATGATTCT GACAATATAAAAGTTACAGCAGTGGATGACAAGCTAGATTTCGTAGTAAAGACAAAAACAGTTTAA Protein sequence : MMENFTERAKQAIELAKREASKLGHNIAGSEHILLGLMAEGQGIAYQVLYKFGLTLESLVREIIDLEGIGLPNTHFQGFS PRTKGIFELSIMEAKMLGHSYIGTEHLLLALLKEKECIGCRLLMEKGIDYNLVFKEIMNLLGGSSAGKEPNQAGNTSSMN SQNPNTPTLNQYGVDLTKEADENRLDPVIGRSKEIERIIQILSRRTKNNPVLIGDPGVGKTAIIEGLAQKINSGDIPSTL KNKRIMTLEMGNLLAGAKYRGEFEERVKKIVEELKANKDVIIFIDEIHNLAGAGGAEGAIDASNIMKPALARGEIQVMGA TTIDEYRKHIEKDSALERRFQTVMVDEPNTEDSIKILHGLRDRYEAHHKVKITDEAIKAAVDLSHRYITDRFLPDKAIDL IDEAASRVRLRKYMEPDNIKELEDKLSKLSMEKEEAIATQDFEKAAKIRDEEKQIKEQLGENKEQWTKKNYTSTEVVLEK DIAEIVSSWTGVPVTRLQMEESTKLLDLENILHKRVIGQEEAVEAISRAIRRARTGMKDPKRPIGSFIFLGPTGVGKTEL SKALAEAMFEDEDSIVRIDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLTEKIRRKPYSVVLFDEIEKAHPDVFNMLLQIL DDGRLTDSKGRTVDFKNTVLIMTSNVGATTIQKQKTLGFSTVTDEEKKEKAAYEKMKDNVMVELKRSFKPEFLNRVDDII VFHALTDRELEKIVYLMISNLEKRLMDKNITIELDEAAMKLITKNGYDLEFGARPLKRAIQRLLEDEISEKLLRGEINDS DNIKVTAVDDKLDFVVKTKTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003935195.1 | protein disaggregation chaperone | VFG0079 | Protein | 0.0 | 58 |
| clpB | YP_003935195.1 | protein disaggregation chaperone | VFG0080 | Protein | 7e-162 | 50 |
