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Name : CLOST_1356 (CLOST_1356) Accession : YP_003936381.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Resistance Product : Two-component response regulator yycF Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1516181 - 1516867 bp Length : 687 bp Strand : - Note : - DNA sequence : ATGGCAAATATCCTTGTCGTTGACGATGAGCCTTTGATAGTAAAAGGGCTGAAGTTTTCACTTGAACAAGGAGGTCATAT AATTGATACATCATTTGATGGAAATGATGCGCTTGAAAATATTAAATCAAAGGATTATGACATTATACTTTTGGATTTGA TGCTGCCAATTATAGATGGATTTGAAGTATGCAAAAAAGTCAGAGAAACCTCTGATGTTCCAATCATAATTTTAAGCGCT AAAGGAGAAGACATTAGCAAAATCAAAGGTCTAGAAATAGGTGCAGACGACTATATAACAAAACCATTTAACATAATGGA GTTAAAGGCTAGAGTTAATGCAATACTGAGGAGAATGGAAAAATCGAAAAAAATAGTTGCTCAAAAACATTTAGGGGATA TTACTTTAAACTATTTAGACAGAAAAGTAACTAGAAACTCTGAGGAAATAAATTTGACCTCGAAGGAATTTGATTTGTTG TTTTTATTAATGGATAATCCTAATAAGGTTTTTTCGAGAGAGGCATTGCTCGAGAAGGTATGGAAGTATGAACATTTTGG GGATTTGAGAACAGTTGATGTGCATATTAGAAAATTAAGAGAAAAAATAGAAGATAACTCCTCGAATCCCGTTCATATTA TGACAAAATGGGGTGAAGGATATTATTTCCAATTTAAAAAAGAATAG Protein sequence : MANILVVDDEPLIVKGLKFSLEQGGHIIDTSFDGNDALENIKSKDYDIILLDLMLPIIDGFEVCKKVRETSDVPIIILSA KGEDISKIKGLEIGADDYITKPFNIMELKARVNAILRRMEKSKKIVAQKHLGDITLNYLDRKVTRNSEEINLTSKEFDLL FLLMDNPNKVFSREALLEKVWKYEHFGDLRTVDVHIRKLREKIEDNSSNPVHIMTKWGEGYYFQFKKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanRB | YP_001698483.1 | regulatory protein | Not tested | Not named | Protein | 3e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_012469.1.7685629. | Protein | 1e-42 | 48 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | AE016830.1.gene1681. | Protein | 2e-34 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_002952.2859905.p0 | Protein | 4e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_007793.3914279.p0 | Protein | 3e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_003923.1003749.p0 | Protein | 3e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_002745.1124361.p0 | Protein | 3e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_009782.5559369.p0 | Protein | 3e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_002951.3237708.p0 | Protein | 3e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_007622.3794472.p0 | Protein | 4e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_002758.1121668.p0 | Protein | 3e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | HE999704.1.gene2815. | Protein | 2e-33 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_009641.5332272.p0 | Protein | 3e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_013450.8614421.p0 | Protein | 3e-38 | 46 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_002951.3238224.p0 | Protein | 2e-33 | 45 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_007793.3914065.p0 | Protein | 2e-33 | 45 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_002758.1121390.p0 | Protein | 2e-33 | 45 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_010079.5776364.p0 | Protein | 2e-33 | 45 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_002952.2859858.p0 | Protein | 2e-33 | 45 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_007622.3794948.p0 | Protein | 2e-33 | 45 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_003923.1003417.p0 | Protein | 2e-33 | 45 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_013450.8614146.p0 | Protein | 2e-33 | 45 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | AM180355.1.gene1830. | Protein | 2e-29 | 45 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | NC_012469.1.7686381. | Protein | 3e-31 | 44 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | FJ349556.1.orf0.gene | Protein | 5e-34 | 44 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | AF155139.2.orf0.gene | Protein | 5e-34 | 43 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | AE000516.2.gene3505. | Protein | 1e-31 | 43 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | CP001581.1.gene280.p | Protein | 9e-22 | 42 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | DQ212986.1.gene4.p01 | Protein | 2e-28 | 42 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | AE015929.1.gene1106. | Protein | 5e-26 | 41 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | HE999704.1.gene1528. | Protein | 9e-27 | 41 |
| CLOST_1356 | YP_003936381.1 | Two-component response regulator yycF | AF130997.1.orf0.gene | Protein | 1e-24 | 41 |
