Gene Information

Name : pdxS (CLOST_0101)
Accession : YP_003935136.1
Strain : Clostridium sticklandii DSM 519
Genome accession: NC_014614
Putative virulence/resistance : Unknown
Product : Pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : 4.-.-.-
Position : 123763 - 124641 bp
Length : 879 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAATCGTTATGACTTAAACAAAAACTTAGCTCAGATGCTAAAGGGCGGAGTAATCATGGATGTAACAAATGCACA
GGAGGCTAAAATAGCTGAAGAAGCTGGAGCTTGTGCAGTTATGGCATTAGAAAGAGTACCTGCTGATATTCGTAAAGACG
GAGGAGTAGCTAGAGCCTCTGACCCTAAAATGATAAAAGAAATTCAATCAGCTGTATCTATACCAGTAATGGCAAAGGTT
CGTATAGGGCATTTTGTAGAGGCTCAGATTTTAGAAGCTCTGAGCGTGGATTACATAGATGAAAGCGAAGTGCTTACACC
AGCAGATCCTAGTCTTCACATAGATAAAAAAGCCTTCAATGTGCCTTTTGTATGTGGAGCAAAGAATCTTGGAGAAGCAC
TTAGAAGAATCGGCGAAGGTGCTTCTATGATTCGTACTAAAGGAGAGCCTGGAACAGGCGATGTAATTGAAGCAGTTCGC
CATATGCGTATGATGAACAGTGAAATAAGACGTATACAGGGACTTACTAAGGAAGAGCTGATGAATGCAGCCAAAGAGCT
TCAGGCTCCTATAGAGCTAGTGACTTATGTACATGAGCACGGAAAGCTTCCTGTTGTAAATTTTGCTGCAGGTGGAGTAG
CCACTCCTGCCGATGCTGCTATGATGATGCAGTTAGGCTGTGATGGTGTGTTTGTAGGCTCTGGAATATTTAAATCTGGA
GATCCAAGAAAGCGAGCTGCAGCCATAGTAAAAGCTGTAACAAATTATAATGACCCTAAAATATTGGCTGAGGTATCAGA
AAATCTTGGCGAAGCTATGGTAGGTATAAATGTATATTCTATATCAAAAGACGATATAATGGCAGACAGAGGTTATTAA

Protein sequence :
MENRYDLNKNLAQMLKGGVIMDVTNAQEAKIAEEAGACAVMALERVPADIRKDGGVARASDPKMIKEIQSAVSIPVMAKV
RIGHFVEAQILEALSVDYIDESEVLTPADPSLHIDKKAFNVPFVCGAKNLGEALRRIGEGASMIRTKGEPGTGDVIEAVR
HMRMMNSEIRRIQGLTKEELMNAAKELQAPIELVTYVHEHGKLPVVNFAAGGVATPADAAMMMQLGCDGVFVGSGIFKSG
DPRKRAAAIVKAVTNYNDPKILAEVSENLGEAMVGINVYSISKDDIMADRGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-83 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-83 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-83 67