|
Name : srlQ3 (Pvag_pPag20097) Accession : YP_003933433.1 Strain : Genome accession: NC_014563 Putative virulence/resistance : Virulence Product : sugar phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.-.-.- Position : 67171 - 68133 bp Length : 963 bp Strand : - Note : Transcriptional regulators DNA sequence : ATGAAAGAACAGGTGCTTTGCGCTGCCCGGGAGACGATTCAGACAGAACTACGTGAGGCATCCAGTCTGACGGAGCGGCT GGACGATGACTTCTTTCACGCTTGCCAGCGCATTCTTGCCTGTAAGGGTAAGGTGATCGTCAGTGGTATTGGGAAGTCTG GCCATATAGGAAGAAAAATTGCGGCAACGATGGCCAGTACCGGTACGCCCGCATTCTATGTTCATGCGGCCGAAGCATTA CACGGCGATCTGGGAATGATTGCAGAAGGAGACGTCCTTATTCTGATTTCATATTCAGGGCATGCCGCAGAATTCCGACG GATGATACCGCTCCTCAAAGCGCTCCCTGTTGATGTCATAGCTTTTACCGGCAACCCAGCTTCACCACTGGGTGAGGCGG CGGATCACTGCATAGACGTACATGTTAAACAGGAAGCCTGTCCGCTTGGGCTTGCGCCGACCTCTTCTGCGGTGAACACT CTGATCATGGGTGATGCCCTTGCCATCGCCGTAATGCGGGCCCACAACTTCAGCGAAGAAGATTATGCGCGGACTCATCC TGCCGGCAGCCTTGGTATGCGCCTGCTGTGTCACGTGAAAGATATCATGCAGACAGATGCCAGAATTCCTGTCGTCGAAC CAACGTCAACGGTTTACGACGCTCTTTTCGAACTGACCCGTACAGGGCTCGGAATGGTCGCTGTAACGGACGGCGATCGC CGGATGCTGGGTGTTTTCACCGATGGAGACCTGCGCCGCTGGCTGCTTAAGGGGGGAGCGCTAAGTTCACCCGTACAGGA CGCCATGACATCTTCCGGGTTCGCCCTGTCGGCAACTCAGCTTGCTGCCGAAGCTAAGGCCCTGCTTCAGGAACTCAGGA TCTCCTCGGCACCGGTGATATCACAGGATGGTTATGTCATCGGCGCCATCAGTTCACTGGATATTAGCGAAGCCGGTATC TGA Protein sequence : MKEQVLCAARETIQTELREASSLTERLDDDFFHACQRILACKGKVIVSGIGKSGHIGRKIAATMASTGTPAFYVHAAEAL HGDLGMIAEGDVLILISYSGHAAEFRRMIPLLKALPVDVIAFTGNPASPLGEAADHCIDVHVKQEACPLGLAPTSSAVNT LIMGDALAIAVMRAHNFSEEDYARTHPAGSLGMRLLCHVKDIMQTDARIPVVEPTSTVYDALFELTRTGLGMVAVTDGDR RMLGVFTDGDLRRWLLKGGALSSPVQDAMTSSGFALSATQLAAEAKALLQELRISSAPVISQDGYVIGAISSLDISEAGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-50 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-49 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 9e-50 | 44 |
