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Name : srlQ1 (Pvag_pPag20078) Accession : YP_003933414.1 Strain : Genome accession: NC_014563 Putative virulence/resistance : Virulence Product : sugar phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 56090 - 57052 bp Length : 963 bp Strand : + Note : - DNA sequence : ATGAAACACGTAATACTGGATGCGGCCCGCGAGACGATTGAAACCGAGCTGCGTGAAGCGTCCCGCCTGACTGAGCGGCT GGACGAAGACTTTCGGCAGGCCTGCGAACGCATTCTTGCCTGTAGCGGAAAAGTGATCGTCAGCGGGATCGGAAAGTCAG GGCATATCGGACGTAAAATTGCAGCCACGCTTGCCAGTACCGGCACGCCGGCCTTTTATGTTCATCCTGCTGAGGCACTG CACGGCGATCTCGGCATGATTACTGCCGGAGATACAGTTATCCTGATTTCTTACTCAGGATACGCCGCAGAGTTCCGCCG TATGGTGCCATTACTTAAGGCGCTTCCGGTCGGGATCGTCGCCTTTACCGGCAATCCGGCATCACCACTGGGTGAAGCCG CCGATCACTGCATCAATATCCACGTGAACAAGGAAGCCTGCCCGCTCGGGCTTGCACCCACCTCCTCTGCCGTTAATACG CTGATTATGGGGGATGCGATGGCAATAGCCCTGATGCAGGCGTGCAATTTCAGTGAACAGGATTATGCCCGTACCCATCC AGCAGGCAATCTTGGTACCCGGCTGCTGTGCCGGGTCGGCGATATTATGCGCACAGACGAGAAGATTCCTCTGGTAAGCA CGTCTGCGACCATTCATGACGCCCTGTTTGAGCTGACGCGTACCGGGCTGGGCCTTGTCGCCATAATAAACGAAGACCGC AGGCTGTCGGGGATCTTTACTGACGGTGATTTGCGTCGATGGCTGCTAAAGGGCGGAACGCTGATTGCGCCGGTTCATGA TGCAATGACCTCGCCCGGTTTTACTTTATCCGCAGGTCAGTATGCGGCTGAGGCGCTGGCTTTATTTCAGAAGCGCAAAA TATCCGCTGCTCCTGTAGTTTCTGATACCGGTGAGGTTAAAGGTGCAATCAATGCCCACGATATCAGGGATGCGGGCATC TGA Protein sequence : MKHVILDAARETIETELREASRLTERLDEDFRQACERILACSGKVIVSGIGKSGHIGRKIAATLASTGTPAFYVHPAEAL HGDLGMITAGDTVILISYSGYAAEFRRMVPLLKALPVGIVAFTGNPASPLGEAADHCINIHVNKEACPLGLAPTSSAVNT LIMGDAMAIALMQACNFSEQDYARTHPAGNLGTRLLCRVGDIMRTDEKIPLVSTSATIHDALFELTRTGLGLVAIINEDR RLSGIFTDGDLRRWLLKGGTLIAPVHDAMTSPGFTLSAGQYAAEALALFQKRKISAAPVVSDTGEVKGAINAHDIRDAGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-50 | 41 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-50 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-49 | 41 |
