Gene Information

Name : cbrB (Pvag_pPag20043)
Accession : YP_003933379.1
Strain :
Genome accession: NC_014563
Putative virulence/resistance : Virulence
Product : achromobactin transport system permease protein cbrb
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 36318 - 37304 bp
Length : 987 bp
Strand : +
Note : ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
GTGAAAGCCCGCTTTCTGTCCTGTTGCAGCCTTCTGATGCTGATGATGCTGCTCAGCGTCATGTCCGGAGCGCGCTTCTA
CCCGCTGGCGCAGGTGGCGGAGGCTTTGTTTCACACCGATCCCGCCTGTGTGGCTGACACCATCATTCGCACTTCCCGGT
TGCCCCGAACATGCCTGGCGATGGGCGTGGGTGCCTTTCTGGCAGTGGCAGGAGGGTTGATGCAGGCTCTGACCCGCAAT
CCTGTAGCATCCCCGGGGCTGTTCGGCGTGAATGCAGGTGCGGCGCTGGCGATTGTGATGGCCAGCAGCATTTTTACCCT
TAGCATCCCCTGGCTGACACTTTTACTGGCATTTTTCGGTGCGAGCACTGTCAGTATGCTGGTGTGGTTCGCCAGCAGAG
CAGGTAATGGACGACACAACCCACTTAGGCTGGTGCTGGCTGGGGTGGCTATAACCGCGCTGTGCAATGCTTTTACCCAG
GCGATTCTGATTATCGATCAGGAGACGCTCGACACAATGCTGTTCTGGCTGGCCGGGAGCCTGACGGGTAACGATTTGCC
GCATATCTATGCAATGTTGCTTCCCGGCACGCTGCTGATAGTCGCCGCCTGCCTGTTTGCAAGCCAGATGAATGTACTGA
GTGCCGGTGATGAGATTGCCACCGGCCTTGGACAAAATATCGTCCGGGTGCGACTGATCGCCAGCCTGCTGGTCGTGGGA
CTGGCGGGAAATGCCGTCGCACTGGCCGGGAGCATTGGTTTCGTCGGACTGATGGTGCCACATATCGCCCGCCAGCTGTT
TGGCAGCGACCTGCGCCTGATGGTGCCAGCCTGTGCGTTGCTTGGCGCATTATTGTTGCTGGCGGCGGATATCGTTGCGC
GCGTGATAATTTTGCCGCAGGAAGTGCCGGTTGGTGTCATGACAGCTTTGATGGGGGCGCCATTTTTCATAGTGCTGGCG
CAGCGCAGGGTAAATAATGTCAGATAA

Protein sequence :
MKARFLSCCSLLMLMMLLSVMSGARFYPLAQVAEALFHTDPACVADTIIRTSRLPRTCLAMGVGAFLAVAGGLMQALTRN
PVASPGLFGVNAGAALAIVMASSIFTLSIPWLTLLLAFFGASTVSMLVWFASRAGNGRHNPLRLVLAGVAITALCNAFTQ
AILIIDQETLDTMLFWLAGSLTGNDLPHIYAMLLPGTLLIVAACLFASQMNVLSAGDEIATGLGQNIVRVRLIASLLVVG
LAGNAVALAGSIGFVGLMVPHIARQLFGSDLRLMVPACALLGALLLLAADIVARVIILPQEVPVGVMTALMGAPFFIVLA
QRRVNNVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 8e-29 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 8e-29 42
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 8e-29 42
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 8e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbrB YP_003933379.1 achromobactin transport system permease protein cbrb VFG0926 Protein 6e-30 42