Gene Information

Name : Pvag_pPag20030 (Pvag_pPag20030)
Accession : YP_003933366.1
Strain :
Genome accession: NC_014563
Putative virulence/resistance : Unknown
Product : transposase for insertion sequence element is986/is6110
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 24984 - 25598 bp
Length : 615 bp
Strand : -
Note : Transposase and inactivated derivatives

DNA sequence : 
ATGAAGCGTGCCGGGATAAAGGCTCAGGTCGGGTATCGAAGCCCACGAGCGCGTAAAGGTGAAGTCAGTATCGTGACACC
CAACAGGCTCCAGCGACAGTTCAACCCGGCAACTCCGGATGTACGTTGGGTAACGGACATAACTTACATCCGAACCCACG
AAGGCTTGCTGTATCTGACCGTAGTTGTTGACCTGTTCTCGCGCAAAGTTATCGGCTGGTCGATGCAACCCCGGATGACA
AAAGATATTGTTCTGAATGCGCTTTTGATGGCCGTGTGGCGACGTAATCCCCAAAAACAGGTGCTGGTTCATTCTGACCA
GGGTAGTCAGTACACAAGCCATGAGTGGCAGTCGTTCCTGAAATCACACGATCTGGAGGGCTGTATGAGCCGTCGTGGTA
ACCGTCACGACAACGCAGTTGCAGAAAGCTTTTTCCAGCAACTGAAGCGGGAACGGATAAAGAATAAGATCTACGGAAAA
CGGGAAGAAGCACGCAGCGATATTTTTGATTACATCGAAATGTTTTATAACAGTAAGCGTCGGCATGGTTCGAGTGATCA
GATGCCACCGACGGAATATGAAAAACAATATTATCAACGGCTCGGAAGTGTCTAG

Protein sequence : 
MKRAGIKAQVGYRSPRARKGEVSIVTPNRLQRQFNPATPDVRWVTDITYIRTHEGLLYLTVVVDLFSRKVIGWSMQPRMT
KDIVLNALLMAVWRRNPQKQVLVHSDQGSQYTSHEWQSFLKSHDLEGCMSRRGNRHDNAVAESFFQQLKRERIKNKIYGK
REEARSDIFDYIEMFYNSKRRHGSSDQMPPTEYEKQYYQRLGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 6e-36 47
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-35 47
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 7e-37 45
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 8e-26 43
unnamed AAC31485.1 L0006 Not tested LEE Protein 5e-26 43
Z5089 NP_290241.1 transposase Not tested LEE Protein 7e-26 43
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 5e-26 43
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 3e-27 41
unnamed CAI43898.1 putative transposase Not tested LEE Protein 3e-27 41
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-26 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pvag_pPag20030 YP_003933366.1 transposase for insertion sequence element is986/is6110 VFG0785 Protein 2e-26 43
Pvag_pPag20030 YP_003933366.1 transposase for insertion sequence element is986/is6110 VFG1484 Protein 5e-27 41