Gene Information

Name : Pvag_pPag20143 (Pvag_pPag20143)
Accession : YP_003933479.1
Strain :
Genome accession: NC_014563
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 91183 - 92757 bp
Length : 1575 bp
Strand : -
Note : Transposase and inactivated derivatives

DNA sequence :
ATGAAACGATCACTTTCTGCAGAAAATGACCGGCTCAGGGCGCTGCTGGACACACAGCAGCGAAGCCTTGAGCAGATGGC
CGAATACAATCGGCTCCTGTCACGGCGGGTGGCAGCCTACGCCAGTGAAATTAACCGCCTGAAGGCGCTGGTTGCGAAAC
TACAGCGCATGCAGTTCGGCAAAAGCTCCGAAAAGCTACGTGAGAAAACAGCACGTCAGGTGCGCGAGGCTGAGGAACGC
ATCAGCGGCCTGCAGGAGGAAATGGCGGAGGTCCTGGGTGAGCAGCATGACCCGGTACTCCCGCAGCCGCTGCGTCAGTC
TTCTGCCCGAAAACCGCTGCCGGCCTCGCTTCCCCGCGAAACCCGCATCCTGCCTCCGGAAGAAACCGCCTGTCCGGCGT
GCGGCGGAGAGCTCAGCGCGCTGGGCTGCGACGTGTCAGAGCAGCTGGAGCTCATAAGCAGCGCCTTCAGGGTTATAGAA
ACGCAGCGGCCTAAGCTGGCCTGCTGCAAGTGTGACCACATCGTTCAGTTACCGATGCCGTCAAAGCCCATTGAACGCAG
CTACGCCGGTCCCGGCCTGCTGGCGCGCATCGTCACGGCGAAGTTTGCGGAGAATACGCCTCACTATCGCCAGTCAGAAA
TCTACCGGCGGCAGGGCGTGGAGCTGAGCCGGGCCACGCTGGGAAGATGGTCCGGGGCAGTCAGCGAACTGCTGGAGCCG
TTGTACGACCTGCTGCGCCAGTACGTGCTGATGCCGGGCAAAGTACACACCGACGATATCCCGGTGCCGGTTCAGGAGCC
GGGCAGCGGCAAAACCCGGACGGCCCGGCTGTGGGTGTACGTGCGGGATGACCGCAACGCCAGGCCGCAGCTGCCGCCGG
CGGTCTGGTTTGCGTATTCACCGGACCGTAAGGGCGAGCATCCACAGCAGCACCTGAGCGGGTACAGAGGTATCCTGCAG
GCAGATGCGTACGGTGGCTACAACGCGTTGTACGAAACCGGCCACATCACCGAAGCAGCCTGTATGGCCCATGCCCGGCG
GAAAATTCACGACGTTCATGTCCGTATGCCGACGGCCGTTACCACCGAAGCGCTCAGGCGCATCGGTGAACTGTACGCCA
TCGAGGCGGAGATACGCGGCAGCCCGGCAGACAAACGGCTGGCGGTGAGAAAAGCCAGAACCGTCCTACTGATGCAGTCT
CTGTACGACTGGATACAGGTGCAGATAAAGGTGCTGTCGCGCCACTCAGACACGGCGAAGGCTTTTGCGTACCTGCTGAA
GCAGTGGGACGCGCTGAACCTGTACTGCAGCACCGGGTGGGCAGAGATAGATAACAACATCGCGGAGAACGCCCTGCGCG
GTGTTGCCCTGGGACGGAAGAACTGGCTATTTGCTGGTTCAGACAGGGGCGGAGAACGTGCTGCTGTTCTGTACTCACTG
GTCGGCACCTGCCGGCTGAACAGCGTGGAGCCGGAGGCGTGGCTGCGCTACGTGCTCAGCCACATTCAGGACTGGCCAGT
GAACCGGCTGCGCGATCTGCTGCCGTGGAAGGCCAATCTTACCTCCACTGATTAA

Protein sequence :
MKRSLSAENDRLRALLDTQQRSLEQMAEYNRLLSRRVAAYASEINRLKALVAKLQRMQFGKSSEKLREKTARQVREAEER
ISGLQEEMAEVLGEQHDPVLPQPLRQSSARKPLPASLPRETRILPPEETACPACGGELSALGCDVSEQLELISSAFRVIE
TQRPKLACCKCDHIVQLPMPSKPIERSYAGPGLLARIVTAKFAENTPHYRQSEIYRRQGVELSRATLGRWSGAVSELLEP
LYDLLRQYVLMPGKVHTDDIPVPVQEPGSGKTRTARLWVYVRDDRNARPQLPPAVWFAYSPDRKGEHPQQHLSGYRGILQ
ADAYGGYNALYETGHITEAACMAHARRKIHDVHVRMPTAVTTEALRRIGELYAIEAEIRGSPADKRLAVRKARTVLLMQS
LYDWIQVQIKVLSRHSDTAKAFAYLLKQWDALNLYCSTGWAEIDNNIAENALRGVALGRKNWLFAGSDRGGERAAVLYSL
VGTCRLNSVEPEAWLRYVLSHIQDWPVNRLRDLLPWKANLTSTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 0.0 83
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-116 67
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 6e-148 64
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 3e-148 64
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 3e-134 61
tnp AEA34686.1 transposase Not tested Not named Protein 9e-140 59
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-139 58
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-139 58
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-139 58
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-139 58
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 8e-139 58
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 3e-139 58
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 6e-139 58
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 3e-139 58
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-139 58
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 9e-139 58
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 5e-123 56
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 1e-122 55
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 1e-122 55
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-98 55
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 8e-129 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pvag_pPag20143 YP_003933479.1 hypothetical protein VFG1700 Protein 3e-116 67
Pvag_pPag20143 YP_003933479.1 hypothetical protein VFG0793 Protein 1e-139 58
Pvag_pPag20143 YP_003933479.1 hypothetical protein VFG1736 Protein 3e-101 55
Pvag_pPag20143 YP_003933479.1 hypothetical protein VFG1051 Protein 7e-99 55