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Name : kdsB (Pvag_0744) Accession : YP_003930395.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 783913 - 784662 bp Length : 750 bp Strand : + Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase DNA sequence : ATGAGTTTCACTGCCATCATTCCTGCGCGCTATGCGTCAACCCGCTTACCCGGCAAGCCGCTGCTCGATATTCACGGTAA ACCGATGGTCGTGCATGTGATGGAGCGCGCCCGTGAATCGGGTGCCAGCCGGGTCATTGTTGCCACCGACCATCCCGATG TGGCTCAGGCAGTGGAAGCGGCAGGCGGTGAAGTCTGCATGACGCGCGCCGATCACCAGTCCGGCACGGAGCGGCTGGCG GAAGTGATCGAAAAATATCAGTTTGCTGATGACGAAATCATCGTCAACGTGCAGGGTGATGAGCCGATGATCCCGGCAGA GATTGTGCGCCAGGTGGCGACCAATCTGGCGGGCTCAGCGGCCGGGATGGCAACGCTGGCGGTGCCAATCACCGATGTGG AAGAAGCCTTCAATCCGAACGCGGTGAAGGTGGTCATGGATGCGAATGGCTATGCGCTCTATTTCTCACGGGCCACCATT CCCTGGGATCGTGAACGCTATGCTGCCTCACGCGAACAGATTGGCGATACGCTTTTGCGACATATTGGCATCTATGCCTA TCGCGCCGGTTTTATTCGCCGCTATGTTGCCTGGGCGCCTTGTCCTCTTGAACAGATTGAGCTGCTCGAGCAACTGCGTG TCTTATGGTACGGCGAAAAAATTCATGTCGCCGTAGCAAAAACCATTCCCAGCGTGGGTGTGGATACGCCAGACGATTTG CAACGCGTCCGCGCTGCCATGCAGGCCTGA Protein sequence : MSFTAIIPARYASTRLPGKPLLDIHGKPMVVHVMERARESGASRVIVATDHPDVAQAVEAAGGEVCMTRADHQSGTERLA EVIEKYQFADDEIIVNVQGDEPMIPAEIVRQVATNLAGSAAGMATLAVPITDVEEAFNPNAVKVVMDANGYALYFSRATI PWDRERYAASREQIGDTLLRHIGIYAYRAGFIRRYVAWAPCPLEQIELLEQLRVLWYGEKIHVAVAKTIPSVGVDTPDDL QRVRAAMQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-34 | 48 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-33 | 47 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-33 | 47 |
