Gene Information

Name : Pvag_0006 (Pvag_0006)
Accession : YP_003929678.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : 3.6.3.-
Position : 5966 - 6718 bp
Length : 753 bp
Strand : -
Note : ABC-type transport systems, ATPase components

DNA sequence : 
ATGAATAACCTGAACGGCGCGAGCTGGCACGGCGCCAGTCTGGAGCTACGCGATCTGACGCTGGCCTATGGCCCGATTGA
GGTGCTGCGTAACGTCTCGCTGCGGGTCGCGCCAGGCAGCACCACCTGCATTATCGGGCCATCCGGCTCGGGTAAATCGA
CACTGCTGCGCGGCATCAACCGGCTGCACGAACCGCAGTCCGGGGATGTCCTGCTGGCTGACCGATCGGTGCTGCACGAC
AAGCCTGATGCGCTGCGGCTGCGGATTGGCATGGTGTTTCAGCATTTTAACCTCTTCCCCGATCACAGCGCGCTGGAGAA
CGTGGCGCTGGCCCCGTGGCGGGTCAAAGGCCTGCCCAAATCGCAGGCGATGGCGATTGCGCGTCAGCGGCTGGAAGAGG
TGGGCCTGGGCCAACGTGCCGATCACCGGCCACGCGATCTCTCCGGCGGTCAGCAGCAGCGGGTCGCGATTGCCCGCGCG
CTGGCGATGGATCCCGAGGTGATGCTGTTTGACGAGGCGACCTCCGCGCTCGATCCCGAACTGGTGAAAGGTGTCCTGAC
GCTGATGGCGGATCTCTGCCGTCGCGGCATGACGATGGTCGTGGTGACCCATGAAATGGGTTTTGCACGCAAGGTGGCAG
ATCAGGTGGTGTTTATGGATGAAGGCGAGATTGTTGAAGCCGGACCACCGGGCGCCATTTTTGATGCACCGCAGTCGCCG
CGACTGCAACGTTTTCTCTCTGAAGTGCTGTAA

Protein sequence : 
MNNLNGASWHGASLELRDLTLAYGPIEVLRNVSLRVAPGSTTCIIGPSGSGKSTLLRGINRLHEPQSGDVLLADRSVLHD
KPDALRLRIGMVFQHFNLFPDHSALENVALAPWRVKGLPKSQAMAIARQRLEEVGLGQRADHRPRDLSGGQQQRVAIARA
LAMDPEVMLFDEATSALDPELVKGVLTLMADLCRRGMTMVVVTHEMGFARKVADQVVFMDEGEIVEAGPPGAIFDAPQSP
RLQRFLSEVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-27 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pvag_0006 YP_003929678.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-28 43
Pvag_0006 YP_003929678.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-26 41