Gene Information

Name : kdpE (Pvag_0530)
Accession : YP_003930184.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Resistance
Product : alkaline phosphatase synthesis transcriptional regulatory protein sphR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 556075 - 556749 bp
Length : 675 bp
Strand : -
Note : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
GTGACCACGGTTTTGATCGTTGAAGATGAAAAAGAGATCCGCCGCTTTGTCCGGCTGGCGCTGGAAAATGAAGATCTGAA
GGTGTTTGACGCCGATACGCTGCAGCGCGGGCTGATTGAAGCGGCAACCCGTAAACCTGATTTAGTGATCCTTGATCTTG
GCCTGCCGGATGGGGATGGCACCGATTTTATCCGTGATCTGCGCCAGTGGAGCGCCATACCGGTGATAGTGCTGTCGGCG
CGCAGTGATGAGCAGGATAAGATCGCCGCACTGGATGCCGGCGCGGATGACTATCTGACCAAACCATTCGGTGTTGGCGA
ACTGCTGGCGCGTGTCCGTGTTGCACTGCGCCGTCATGGTGGCCAGCAGCCCGAAGCCAGAATTCAGTTTGCCGACGTCA
GCGTCGATTTTGCCGCACGGCGGGTACAGCGCGGCGGCAGTGAGATTCACCTCACGCCGATTGAATTTCGTCTGTTGAGC
ATTCTGCTGAATAATGCCGGCAAGGTGCTGACGCAGCGGCAGCTGCTGAGCCAGGTCTGGGGACCCAATGCGGTAGAGCA
CAGCCACTATCTGCGCATTTATATGGGACATCTGCGCCAGAAGCTGGAAGCAAATCCGACACGACCAGCCCATCTGCTGA
CCGAAACCGGGATCGGCTATCGCTTTATGCCATAA

Protein sequence : 
MTTVLIVEDEKEIRRFVRLALENEDLKVFDADTLQRGLIEAATRKPDLVILDLGLPDGDGTDFIRDLRQWSAIPVIVLSA
RSDEQDKIAALDAGADDYLTKPFGVGELLARVRVALRRHGGQQPEARIQFADVSVDFAARRVQRGGSEIHLTPIEFRLLS
ILLNNAGKVLTQRQLLSQVWGPNAVEHSHYLRIYMGHLRQKLEANPTRPAHLLTETGIGYRFMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 7e-27 43
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_003930184.1 alkaline phosphatase synthesis transcriptional regulatory protein sphR NC_013450.8614146.p0 Protein 1e-19 41
kdpE YP_003930184.1 alkaline phosphatase synthesis transcriptional regulatory protein sphR NC_002951.3238224.p0 Protein 1e-19 41
kdpE YP_003930184.1 alkaline phosphatase synthesis transcriptional regulatory protein sphR NC_007793.3914065.p0 Protein 1e-19 41
kdpE YP_003930184.1 alkaline phosphatase synthesis transcriptional regulatory protein sphR NC_002758.1121390.p0 Protein 1e-19 41
kdpE YP_003930184.1 alkaline phosphatase synthesis transcriptional regulatory protein sphR NC_010079.5776364.p0 Protein 1e-19 41
kdpE YP_003930184.1 alkaline phosphatase synthesis transcriptional regulatory protein sphR NC_002952.2859858.p0 Protein 1e-19 41
kdpE YP_003930184.1 alkaline phosphatase synthesis transcriptional regulatory protein sphR NC_007622.3794948.p0 Protein 1e-19 41
kdpE YP_003930184.1 alkaline phosphatase synthesis transcriptional regulatory protein sphR NC_003923.1003417.p0 Protein 1e-19 41