Gene Information

Name : fepC (Pvag_3662)
Accession : YP_003933229.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Virulence
Product : ferric enterobactin ABC transporter ATP-binding protein fepC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.-
Position : 3891583 - 3892329 bp
Length : 747 bp
Strand : +
Note : ABC-type transport system, ATPase component

DNA sequence : 
ATGACAAAAAAAATCGTGGCGGAGAATCTCTCTGTCGCGATCCCTGACGGTGAGCTGACCGTGATCATCGGTCCCAACGC
CTGCGGAAAATCGACGCTGCTGCGTACCTTAAGCCGCCTGGTCTCGCCGCTACAGGGCGAGGTGCTGCTGGATGGCAATA
CGATTGCTCACTACGCTACCAAAGAGGTGGCACGCCGGCTGGGGCTGCTGCCGCAAAGCTCGAACGCGCCTGCGGGTATC
AGCGTCAGCGAACTGGTGGCGCGCGGGCGTTATCCGCACCAGTCGCTGTTCGGGCGCTGGCGACAGGAAGATGAGGCAGC
GGTGCAGCAGGCCATGCAGGCCACCGGCGTGGCCGGTTTAGCGCAGCAGCAGGTTGATACGCTCTCTGGCGGTCAGCGGC
AGCGGGTGTGGATTGCGATGGTGCTGGCTCAGCAGACACCGCTATTGCTGCTGGATGAACCGACCACCTGGCTGGATATC
GCCCATCAGATTGAACTGCTGGAATTAATGCAGGATCTCAATCAGCAGCATGGCCGAACGCTGGTGGTGGTGCTGCACGA
TCTTAATCAGGCGTGCCGCTACGCCAGCCACCTGATAGCGATGCGCGACGGGAAAATCGTTGCCGAAGGGAAACCGGCGG
AGATTGTGACGCCGGAACTGATAGAAGCGATCTACGGCCTGCGCTGCATCATCATTAACGATCCCGTGGCCGGTACGCCG
ATGATTGTGCCGCTGGGCAGAGGCTGA

Protein sequence : 
MTKKIVAENLSVAIPDGELTVIIGPNACGKSTLLRTLSRLVSPLQGEVLLDGNTIAHYATKEVARRLGLLPQSSNAPAGI
SVSELVARGRYPHQSLFGRWRQEDEAAVQQAMQATGVAGLAQQQVDTLSGGQRQRVWIAMVLAQQTPLLLLDEPTTWLDI
AHQIELLELMQDLNQQHGRTLVVVLHDLNQACRYASHLIAMRDGKIVAEGKPAEIVTPELIEAIYGLRCIIINDPVAGTP
MIVPLGRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-58 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-58 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-58 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-58 52
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-47 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 9e-60 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 9e-60 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-57 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_003933229.1 ferric enterobactin ABC transporter ATP-binding protein fepC BAC0164 Protein 4e-47 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_003933229.1 ferric enterobactin ABC transporter ATP-binding protein fepC VFG0925 Protein 9e-85 74
fepC YP_003933229.1 ferric enterobactin ABC transporter ATP-binding protein fepC VFG1042 Protein 3e-47 50