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Name : yrbH (Pvag_3639) Accession : YP_003933206.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Virulence Product : isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3871287 - 3872270 bp Length : 984 bp Strand : - Note : sugar phosphate isomerase involved in capsule formation DNA sequence : ATGTCATATCAGCAACCAACAGCATTTGATTTTCAGCAGGCGGGGAAAACCGTCCTGCGCATCGAGCGTGAAGGACTGGA ACAGCTCGATCAATATATTAATGACGATTTCGCCCGCGCCTGCGCCCTGATCTACGCCTGTCAGGGTAAAGTGGTCGTGA TGGGCATGGGTAAGTCTGGTCATATCGGCAAAAAAATGGCGGCGACCTTTGCCAGTACCGGTACGCCAGCCTTTTTTGTT CATCCGGCCGAAGCCAGCCATGGCGACCTGGGCATGGTGAGCAAAAATGATGTGGTGATTGCCATCTCTAACAGCGGTGA GTCGAATGAAATCCTCGCGCTGATTCCGGTGTTAAAACGTCAGCACATTGCGCTGATCTGCATGACAGGACGGCCTGACA GCGCGATGGGCCGGGTTGCCGATGTGCATCTGTGTGTCCATGTTCCGCAGGAAGCCTGCCCGTTAGGCCTTGCGCCAACC ACCAGTACCACAGCCACACTGGTGATGGGCGATGCGCTGGCGGTTTCGCTGCTGGAAGCACGTGGATTCACGGCGGAAGA TTTCGCCCTCTCCCACCCTGGCGGTGCGCTGGGCCGCAAACTGCTGCTGCATGTAGCGGATATCATGCACAGCGGCGATG AGCTGCCGCACGTCACCCGTGACGCCTCACTGCGTGATGCGCTGCTGGAGATTACCCGCAAAAATCTGGGCCTGACGGTT ATCGTCGACGGTCTGATGAAAATTGAAGGTATCTTTACCGATGGTGACCTGCGCCGCATCTTTGATATGGGCATCGATTT TCAGCGCGCCACCATCGGGGAAGTGATGACGCCAGGTGGCATCCGCGTCCGGCCAAATATGCTGGCGGTTGAAGCCCTGA ACCTGATGCAGACCAAAAACATTACCTCGATTCTGGTGGCCGATGACGACCATCTGCTCGGTGTGGTACATATGCATGAC ATGCTGCGCGCTGGCGTAGTCTGA Protein sequence : MSYQQPTAFDFQQAGKTVLRIEREGLEQLDQYINDDFARACALIYACQGKVVVMGMGKSGHIGKKMAATFASTGTPAFFV HPAEASHGDLGMVSKNDVVIAISNSGESNEILALIPVLKRQHIALICMTGRPDSAMGRVADVHLCVHVPQEACPLGLAPT TSTTATLVMGDALAVSLLEARGFTAEDFALSHPGGALGRKLLLHVADIMHSGDELPHVTRDASLRDALLEITRKNLGLTV IVDGLMKIEGIFTDGDLRRIFDMGIDFQRATIGEVMTPGGIRVRPNMLAVEALNLMQTKNITSILVADDDHLLGVVHMHD MLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-47 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 8e-48 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-47 | 43 |
