Gene Information

Name : Pvag_3570 (Pvag_3570)
Accession : YP_003933138.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3795008 - 3795667 bp
Length : 660 bp
Strand : -
Note : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCGTGTTACTGGTTGAAGATGATGAAATGATCGGCGCGAACCTGCAACAGGCACTGCAGGGCGCGGGCTGGTCAGT
AGATTGGGTGCGCGATGGCGTCTATGCCCAGAATGCCTGGAGCGAAGGCGGCTACAGCTGTGTACTGCTTGATCTCGGCT
TACCGCGCGATGACGGTCTGCAGGTTCTGCGCCGGGCGCGCGGGCGCGGCGATGCCACGCCGGTCCTGATTCTTACCGCA
CGCGACACGGTGGCGCAGCGTATTCAGGGACTCGACAGCGGCGCGGACGACTACCTGCTTAAACCGTTCGATCTACAGGA
AGTGATGGCCCGGATGCGCGCCATTACCCGGCGCAGCCACGGCGCGGCAGACTCGGTGCTTGGCAGCGGCGATGTGCAGC
TGGACATGATGACCCGCGAGGTGCTCTACAAAGGCCAGCGCGAGCAGCTGACGGCGCGGGAATATGCCCTGCTCTACGCG
CTGCTGGAGCGGCCGGGCGCTATTCTGTCGCGCGAGCAACTGGAAAACCGCATCTACGGCTGGGGCGATGAAGTCAGCAG
CAACGCGGTGGATGTCCTGATCCACGGCATGCGTCGCAAACTCGATAACGACGTGATCCGTAATGTACGCGGACTGGGCT
GGCGGGTTCCGGCGATATGA

Protein sequence : 
MRVLLVEDDEMIGANLQQALQGAGWSVDWVRDGVYAQNAWSEGGYSCVLLDLGLPRDDGLQVLRRARGRGDATPVLILTA
RDTVAQRIQGLDSGADDYLLKPFDLQEVMARMRAITRRSHGAADSVLGSGDVQLDMMTREVLYKGQREQLTAREYALLYA
LLERPGAILSREQLENRIYGWGDEVSSNAVDVLIHGMRRKLDNDVIRNVRGLGWRVPAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pvag_3570 YP_003933138.1 transcriptional regulator BAC0197 Protein 6e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pvag_3570 YP_003933138.1 transcriptional regulator VFG0473 Protein 2e-26 45
Pvag_3570 YP_003933138.1 transcriptional regulator VFG1390 Protein 9e-22 42