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Name : ribD (Pvag_0353) Accession : YP_003930015.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 385142 - 386242 bp Length : 1101 bp Strand : + Note : Pyrimidine deaminase DNA sequence : ATGGACGAACGCTATATGGCGCGTGCGCTGGAACTGGCGCGACGCGGCCGTTTTACGACCATGCCGAACCCGAATGTCGG CTGTGTGATTGTGCGCGATGGTGAAGTCGTGGGTGAGGGCTGGCATCAGCGTGCCGGTGAACCCCATGCTGAAGTCCACG CTCTGCGCATGGCTGGCGAGAAAGCGCGTGGCGCAACGGCCTATGTCACGCTGGAGCCGTGCAGCCATCATGGCCGCACG CCGCCCTGCTGTGATGCGCTGATCGCCGCAGGTGTGATCCGTGTCGTCGCTGCCATGCAGGACCCGAATCCGCAGGTCGC GGGGCGCGGACTGCACCGTCTGCATCAGGCGGGCATCGACGTCAGCCATGGTCTGATGATGCCGGAAGCCGAAGCACTCA ATCGCGGCTTCCTCAAGCGCATGCGCACCGGCTTTCCCTGGATTCAGCTCAAGCTGGGCGCGTCACTGGATGGCCGCACG GCCATGGCCAGTGGCGAGAGCCAGTGGATCACCTCTGAGGCTGCCCGCCGTGATGTGCAGCGTCTGCGGGCGCAAAGCGC CGCCATTCTCAGCAGTAGCGCTACGGTGCTGGCGGACGATCCCTCTCTGACAGTGCGCTGGTCTGAACTCAATACCGACA GCCAGGCTCTGGTTGATGAGCAGCAACTGCGTCAGCCGGTACGTGTGATTATCGACAGCCAGAATCGCGTGACGCCGCAG CATCGGCTTATCTCACAGCCGGGCGAAACCTGGCTGATGCGCCATCAGCCGGATCAGCAGCTCTGGCCCGCTGACGTCAC GCAAATCGCCGTGCCGCTGCGCGAACAGCAGCTGGATCTGGTGGCGATGATGATGCTGCTGGGACAGCGACAGATTAACA GCGTCTGGGTTGAAGCGGGTGCGACGCTCGCCGGTGCCCTGTTACAGGCCGGGCTGGTGGATGAACTGATCGTTTATCTG GCACCTAAGCTGTTAGGTCATGAAGGACGCGGCCTGTGTCAGCTGCCGGGGCTCAGCCAACTGGCTGACGCACCTGCGTT CCGTTTCAGCGATGTCCGGCAGGTCGGTGACGATTTACGTCTGACCCTGACACCGCAATAG Protein sequence : MDERYMARALELARRGRFTTMPNPNVGCVIVRDGEVVGEGWHQRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHHGRT PPCCDALIAAGVIRVVAAMQDPNPQVAGRGLHRLHQAGIDVSHGLMMPEAEALNRGFLKRMRTGFPWIQLKLGASLDGRT AMASGESQWITSEAARRDVQRLRAQSAAILSSSATVLADDPSLTVRWSELNTDSQALVDEQQLRQPVRVIIDSQNRVTPQ HRLISQPGETWLMRHQPDQQLWPADVTQIAVPLREQQLDLVAMMMLLGQRQINSVWVEAGATLAGALLQAGLVDELIVYL APKLLGHEGRGLCQLPGLSQLADAPAFRFSDVRQVGDDLRLTLTPQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 6e-62 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 6e-62 | 48 |
