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Name : dnaB (Pvag_3522) Accession : YP_003933090.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : Replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 3739316 - 3740794 bp Length : 1479 bp Strand : + Note : - DNA sequence : ATGAGGGTGAGGCGCGCACCCCAACTAAGGTATACTTGCGCGTCCCCACAGAAGATCGGTAATGCATTCACTATGGCAGG AAATAAACCCACCAACAAATCGAACGAAACGCAGGATCGCCAGCTCGCAGGCGTGAAAATGCCCCCGCATTCTCTGGAAG CGGAGCAGTCGGTGCTCGGTGGGTTAATGCTGGATAACGAGCGCTGGGATAACGTCTCTGAGCGCGTCGTCGCGAATGAT TTTTTCAACCGCTCGCATCGGCTGATTTTTTCCGAGATGCAGCGGCTGCTGGAAAACAGCAAACCCATCGACCTGATTAC GCTCTCTGAATCGCTGGAAACCCGCGGCGAACTGGAGATGGCCGGTGGCTTCGCCTATCTGGCTGAGCTGGCGAAAAATA CCCCGAGTGCGGCGAACATCGGCGCTTATGCTGACATTGTGCGCGAACGCGCAGTGGTACGTGAGATGATCTCCGTCGCC AACCAGATTGCTGATGCCGGCTACGATCCGCAGGGACGTAACAGCGAAGAGCTGCTCGACTTCGCAGAGTCGAACGTCTT TAAAATTGCGGAAGCGCGTGCGGATAAAGATGCTGGCCCGAAAAACATCGAGCAGATTCTGGAATCAACCGTCTCCCGTA TCGAATCGCTCTATCAGACACCGCATGACGGCGTCACCGGCGTGGATACTGGCTATCAGGACCTCAATAAAAAGACTGCC GGCCTGCAGGGCTCTGACCTGATTATTGTTGCCGCCCGTCCATCGATGGGTAAAACCACCTTTGCGATGAACCTGTGCGA AAACGCCGCCATGCTGCAGGAGAAGCCGGTGCTGATCTTCAGTCTGGAGATGCCCAGCGAGCAGATCATGATGCGTATGC TGGCGTCACTTTCCCGCGTCGATCAGACCCGCATCCGAACCGGACAGCTGGATGATGAGGACTGGGCGCGCATCTCCGGC ACCATGGGCATCCTGCTGGAGAAGAAGAACATGTACATCGATGACTCTTCTGGCCTGACGCCCACCGAGGTGCGTTCGCG CGCCCGACGCATCTACCGTGAAAACGGTGGCTTAAGTATGATCATGATCGACTACCTGCAGCTGATGCGCGTGCCGTCAC TGTCGGACAACCGTACGCTCGAGATTGCTGAGATCTCCCGCTCGCTGAAAGCGCTGGCCAAAGAACTGAATGTGCCGGTG GTGGCGCTGTCGCAGCTTAACCGCTCACTGGAGCAGCGTGCTGACAAACGGCCGGTCAACTCGGATCTGCGTGAATCGGG TTCGATCGAGCAGGATGCGGATTTGATCATGTTTATCTATCGCGATGAGGTTTACCACGAGAACAGCGATCTGAAAGGGA TTGCCGAGATCATCCTGGGTAAACAGCGTAATGGCCCGATCGGTACGGTGCGCCTGACCTTTAATGGCCAGTGGTCACGC TTCGACAACTACGCGGGTCCGCAATACGACGACGAATAA Protein sequence : MRVRRAPQLRYTCASPQKIGNAFTMAGNKPTNKSNETQDRQLAGVKMPPHSLEAEQSVLGGLMLDNERWDNVSERVVAND FFNRSHRLIFSEMQRLLENSKPIDLITLSESLETRGELEMAGGFAYLAELAKNTPSAANIGAYADIVRERAVVREMISVA NQIADAGYDPQGRNSEELLDFAESNVFKIAEARADKDAGPKNIEQILESTVSRIESLYQTPHDGVTGVDTGYQDLNKKTA GLQGSDLIIVAARPSMGKTTFAMNLCENAAMLQEKPVLIFSLEMPSEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISG TMGILLEKKNMYIDDSSGLTPTEVRSRARRIYRENGGLSMIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELNVPV VALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIILGKQRNGPIGTVRLTFNGQWSR FDNYAGPQYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-98 | 54 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-103 | 53 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-103 | 52 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 7e-104 | 52 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-98 | 51 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 9e-86 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-90 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-90 | 49 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-80 | 46 |
