Gene Information

Name : dnaB (Pvag_3522)
Accession : YP_003933090.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : Replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 3739316 - 3740794 bp
Length : 1479 bp
Strand : +
Note : -

DNA sequence :
ATGAGGGTGAGGCGCGCACCCCAACTAAGGTATACTTGCGCGTCCCCACAGAAGATCGGTAATGCATTCACTATGGCAGG
AAATAAACCCACCAACAAATCGAACGAAACGCAGGATCGCCAGCTCGCAGGCGTGAAAATGCCCCCGCATTCTCTGGAAG
CGGAGCAGTCGGTGCTCGGTGGGTTAATGCTGGATAACGAGCGCTGGGATAACGTCTCTGAGCGCGTCGTCGCGAATGAT
TTTTTCAACCGCTCGCATCGGCTGATTTTTTCCGAGATGCAGCGGCTGCTGGAAAACAGCAAACCCATCGACCTGATTAC
GCTCTCTGAATCGCTGGAAACCCGCGGCGAACTGGAGATGGCCGGTGGCTTCGCCTATCTGGCTGAGCTGGCGAAAAATA
CCCCGAGTGCGGCGAACATCGGCGCTTATGCTGACATTGTGCGCGAACGCGCAGTGGTACGTGAGATGATCTCCGTCGCC
AACCAGATTGCTGATGCCGGCTACGATCCGCAGGGACGTAACAGCGAAGAGCTGCTCGACTTCGCAGAGTCGAACGTCTT
TAAAATTGCGGAAGCGCGTGCGGATAAAGATGCTGGCCCGAAAAACATCGAGCAGATTCTGGAATCAACCGTCTCCCGTA
TCGAATCGCTCTATCAGACACCGCATGACGGCGTCACCGGCGTGGATACTGGCTATCAGGACCTCAATAAAAAGACTGCC
GGCCTGCAGGGCTCTGACCTGATTATTGTTGCCGCCCGTCCATCGATGGGTAAAACCACCTTTGCGATGAACCTGTGCGA
AAACGCCGCCATGCTGCAGGAGAAGCCGGTGCTGATCTTCAGTCTGGAGATGCCCAGCGAGCAGATCATGATGCGTATGC
TGGCGTCACTTTCCCGCGTCGATCAGACCCGCATCCGAACCGGACAGCTGGATGATGAGGACTGGGCGCGCATCTCCGGC
ACCATGGGCATCCTGCTGGAGAAGAAGAACATGTACATCGATGACTCTTCTGGCCTGACGCCCACCGAGGTGCGTTCGCG
CGCCCGACGCATCTACCGTGAAAACGGTGGCTTAAGTATGATCATGATCGACTACCTGCAGCTGATGCGCGTGCCGTCAC
TGTCGGACAACCGTACGCTCGAGATTGCTGAGATCTCCCGCTCGCTGAAAGCGCTGGCCAAAGAACTGAATGTGCCGGTG
GTGGCGCTGTCGCAGCTTAACCGCTCACTGGAGCAGCGTGCTGACAAACGGCCGGTCAACTCGGATCTGCGTGAATCGGG
TTCGATCGAGCAGGATGCGGATTTGATCATGTTTATCTATCGCGATGAGGTTTACCACGAGAACAGCGATCTGAAAGGGA
TTGCCGAGATCATCCTGGGTAAACAGCGTAATGGCCCGATCGGTACGGTGCGCCTGACCTTTAATGGCCAGTGGTCACGC
TTCGACAACTACGCGGGTCCGCAATACGACGACGAATAA

Protein sequence :
MRVRRAPQLRYTCASPQKIGNAFTMAGNKPTNKSNETQDRQLAGVKMPPHSLEAEQSVLGGLMLDNERWDNVSERVVAND
FFNRSHRLIFSEMQRLLENSKPIDLITLSESLETRGELEMAGGFAYLAELAKNTPSAANIGAYADIVRERAVVREMISVA
NQIADAGYDPQGRNSEELLDFAESNVFKIAEARADKDAGPKNIEQILESTVSRIESLYQTPHDGVTGVDTGYQDLNKKTA
GLQGSDLIIVAARPSMGKTTFAMNLCENAAMLQEKPVLIFSLEMPSEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISG
TMGILLEKKNMYIDDSSGLTPTEVRSRARRIYRENGGLSMIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELNVPV
VALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIILGKQRNGPIGTVRLTFNGQWSR
FDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-98 54
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-103 53
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-103 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 7e-104 52
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-98 51
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 9e-86 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-90 49
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-90 49
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 3e-80 46