Gene Information

Name : traF (Pvag_3518)
Accession : YP_003933086.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3735288 - 3736538 bp
Length : 1251 bp
Strand : +
Note : -

DNA sequence :
ATGGTGAAAAAATCCGCTCAACGTTCAGCGCTGAAGTATTCCGCTGCAGCGACCGCGCTTTTCCTTTCTTCTTCCGCCAT
GGCGGCAGGGACTTGGTATGATGCACGTAATGACGCCATGGGCGGCACCGGCGTAGCATCTTCTGTTTATGGCTCAGCAG
TGCTGGCGAACCCGGCATTAATGACGCGTGCTAAATCTGACGATAACGTCAGCATTATTATTCCCTCGGCAGGAATTCAG
GTTACTGATAAAGATAAGCTGATTGATAAAGTCGATGATATTACCGACACCGTGGATCGCTATCGCGACGTGATTGGTAA
CCTGACTTTTGCGGATTATCTGCGTGGCTACCCTGAACTGCGTGCTGCCTCCGGCGATGTTGCTGACAAGCTCAGCGATT
TGCGCGGTAACAAAGCGGACGGCAGTGCAGGCGTGGCCGTGGCCGTCACGATCCCTAATGAGACCCTGCCTTTTGCGTTT
ATTACCAAAGCCTACGGTACGGCGCACGTCCGTGCCAACGTGGTCCAGGGTGATATTGACTACCTGCGCGGTGTTGCTAA
CGGAACGGTGCTGCCACGTCCTGGCGATCAAAATAACCTGCGTTCCAGTGCGAATGGCTTAGCGGCACTGACCATTGATT
ATGGTGTGGCAGTGGCACATGAGTTCACCATCGCCGGTCAGCCAGTCTCGGTGGGCGTAACGCCGAAAGTGCAGAAAACC
TCGCTCTATAACTACACTGCCAGCATCTATAACTACGACAAGAACGACATCAATAATAGCCAGTATCGCAGCACCGACAC
CGGTTTTAACGTTGATGCCGGTCTGGCGACTACCTTTGCTGAAAACTGGACGCTGGGTGTGACCGGACAGAACCTGGTTT
CGCGCGATCTGCAGACTAAAGAGGTCAACGGGTTCCGCGATACCTACCAGATTCGCCCGCTGGTCACCACCGGACTATCC
TGGGATAAAGGGCCGTTTACCGTGACAGGCGATGTGGATCTGACTGAAACCAAACGCTTCAAAACCCAGGATAACAGCCA
GTATGCGGCAGTAGGGGCGGAGTACCGCGTGCTTGACTGGCTGCAACTGCGTGCCGGTTATCGTGCGGACATGCGGTCTA
ACGACGAAAATGTTGCCACCGCAGGTTTTGGTCTGTCACCGTTTAACAAAGCTGTCCATCTGGATCTGGCTGGCTCGGTG
GGGGCTAACAACACCTGGGGCGCGATGATGCAGTTGGGCTTTAACTTCTAA

Protein sequence :
MVKKSAQRSALKYSAAATALFLSSSAMAAGTWYDARNDAMGGTGVASSVYGSAVLANPALMTRAKSDDNVSIIIPSAGIQ
VTDKDKLIDKVDDITDTVDRYRDVIGNLTFADYLRGYPELRAASGDVADKLSDLRGNKADGSAGVAVAVTIPNETLPFAF
ITKAYGTAHVRANVVQGDIDYLRGVANGTVLPRPGDQNNLRSSANGLAALTIDYGVAVAHEFTIAGQPVSVGVTPKVQKT
SLYNYTASIYNYDKNDINNSQYRSTDTGFNVDAGLATTFAENWTLGVTGQNLVSRDLQTKEVNGFRDTYQIRPLVTTGLS
WDKGPFTVTGDVDLTETKRFKTQDNSQYAAVGAEYRVLDWLQLRAGYRADMRSNDENVATAGFGLSPFNKAVHLDLAGSV
GANNTWGAMMQLGFNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00459.1 unknown Not tested SHI-1 Protein 7e-52 41