Gene Information

Name : rdgC (Pvag_0325)
Accession : YP_003929987.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : Recombination-associated protein rdgC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 353846 - 354757 bp
Length : 912 bp
Strand : -
Note : DNA recombination-dependent growth factor C

DNA sequence :
ATGTTGTGGTTTAAAAATATGATGGTTTATCGTCTGAATCGTGACATTCCGTTGTCCGCAGATGAGATGGAAAAACAGCT
CGACGCCTTCACGTTTTCACCGTGTGGCAGTCAGGATATGAGCAAGACCGGCTGGGTCCCGCCGATGGGTAACCGCAGCG
ATGCGCTGACCCACGAGAACAAAGGCCAGATTGTGATTTGCGCCCGCAAAGAGGAGAAAATCCTGCCGTCGCCGGTCGTG
AAACAGGCGCTGGAAGCGAAAATCGACAAGCTGGAATCTGAGCAGAGCCGCAAGCTCAAAAAGACCGAAAAAGATTCGCT
GAAAGATGAAGTGCTGCACAGCCTGCTGCCGCGCGCCTTCAGCCGTTTCAGCCAGACTTATCTGTGGATCGACACGGTCA
ATAACCTGATTATGGTTGACTGTGCCAGCGCGAAAAAAGCGGAAGATACCCTGGCGCTGCTGCGCAAAAGCCTGGGTTCA
CTGCCGGTGGTGCCGCTGACGCTGGAAAACCCGATCGAGCTGACCCTGACCGAATGGGTGCGTTCGGGCGACCTGCCTGC
CGGTTTTGCACTGATGGATGAAGCGGAGCTGAAAGCGCTGCTGGAAGATGGCGGCGTCATCCGCTGTAAGAAACAGGATC
TGGTGTGTGACGAGATCGCCAACCATATCGAAGCCGGTAAGGTAGTGACCAAACTGGCACTCGACTGGCAGGAGCGCATT
CAGTTCGTGCTGGCGGATGACGGTTCGGTAAAACGTCTGAAGTTCAGCGACACGCTGCGCGACCAGAACGACGATATCGA
TCGCGAAGATTTTGCCCAGCGTTTTGATGCAGACTTTATTCTGATGACCAGCGAACTGGCGGCACTGACCAGCAATCTGG
TGGAAGCGTTAGGCGGCGAAGCCCAGCGTTAA

Protein sequence :
MLWFKNMMVYRLNRDIPLSADEMEKQLDAFTFSPCGSQDMSKTGWVPPMGNRSDALTHENKGQIVICARKEEKILPSPVV
KQALEAKIDKLESEQSRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTYLWIDTVNNLIMVDCASAKKAEDTLALLRKSLGS
LPVVPLTLENPIELTLTEWVRSGDLPAGFALMDEAELKALLEDGGVIRCKKQDLVCDEIANHIEAGKVVTKLALDWQERI
QFVLADDGSVKRLKFSDTLRDQNDDIDREDFAQRFDADFILMTSELAALTSNLVEALGGEAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 8e-94 62