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Name : kdpB (Pvag_3067) Accession : YP_003932665.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase, B subunit Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 3234364 - 3236412 bp Length : 2049 bp Strand : - Note : High-affinity K+ transport system, ATPase chain B DNA sequence : ATGAGTCGTCAACAACAGGCGTTATTTGACGCAGCCCTGCTGCGTACCTCGGCCTGGGATGCGGTGAAAAAGCTCGATCC GCGGGTACAGTTCCGTAATCCGGTGATGTTTGTGGTCTGGCTCGGCAGCGTGCTGACCACGCTGCTGGCGCTGGCAATGT TATTCGGCAGGATCAGCGGCAGCGCCAGCTTTACCGGCGCGATTGCACTCTGGCTCTGGTTCACCGTGCTGTTCGCCAAC CTGGCGGAGGCGCTGGCAGAAGGGCGCAGCAAGGCCCAGGCCAGCAGCCTGAAAGGGGTCAAAAAGACCAGCTTTGCTAA AAAACTGTCAGCGGCGCGCTATGGCGTGGAGTGGCAGCAGGTCAGTGCCGATGCGCTGCGTAAAGGCGACGCGGTGCTGG TCGAAGCGGGTGACATCATTCCCTGCGACGGTGAAGTGATGGAGGGCGGTGCCTCAGTGGATGAGAGCGCGATTACCGGT GAATCTGCACCGGTCATCCGTGAGTCAGGCGGTGACTTCGCCTCTGTGACAGGCGGTACGCGTATTCTCTCTGACTGGCT GGTGATCACCTGTAGCGCCAACCCGGGCGAAACCTTCCTTGACCGGATGATCGCCATGGTGGAAGGGGCGAAGCGCCGTA AAACCCCGAATGAGATCGCCCTGACCATCCTGCTGGTGTCACTGACCATCGTGTTCCTGCTGGCGACCGTCACACTCTGG CCGTTCTCGGCATGGGGCGGCACGCCGGTCAGCATCACCGTGCTGGTGGCGCTGCTGGTCTGTCTGATCCCGACCACTAT CGGCGGCCTGCTGTCGGCGATTGGTGTGGCGGGAATGAGCCGGATGCTGGGTGCGAACGTCATTGCGACCAGTGGACGTG CGGTGGAAGCCGCCGGCGATGTGGATGTGCTGATGCTGGACAAAACCGGCACCATCACGCTGGGTAACCGTCAGGCGACC CAGTTCCTGCCCGCGCCGGGCGTCAGCGAAGAGCAGCTGGCCGACGCCGCGCAGCTCGCCTCGCTGGCTGATGAAACGCC AGAGGGCCGCAGCATCGTGGTGCTGGCGAAGCAGCGCTTTAATCTGCGTGAGCGCGATCTCAGCAGCATGGGTGCCAGCT TTATTCCGTTCTCAGCCCAGACCCGCATGAGTGGCGTAAACGTGCAGGAGCGGCTGATCCGCAAGGGCGCGGTCGATGCG GTCCGTCGTCATATCGAAGCGAACCATGGCCGTTTCCCTGCCGAGGTCAATGCGCAGGTGGAAGAGGTGGCACGCAGTGG CGGCACGCCGCTGGTGGTGTCCGAGGGCGCGAACGTGCTGGGCGTGGTGGCGCTGAAAGATATCGTGAAAGGCGGCATCA AAGAGCGCTTTGCCGAACTGCGCAAAATGGGCATCAAAACGGTGATGATCACCGGCGATAACCCGCTGACCGCCGCGGCC ATTGCGGCGGAAGCAGGCGTGGATGACTTCCTGTCAGAGGCGACCCCGGAAGCCAAGCTGGCGCTGATCCGCCAGTATCA GGCAGAAGGACGGTTAGTGGCGATGACCGGCGACGGCACCAACGATGCGCCTGCCCTGGCGCAGGCGGATGTGGCGGTGG CGATGAACTCCGGTACGCAGGCGGCGAAAGAGGCGGGCAACATGGTCGATCTCGACTCGAACCCGACCAAGCTGCTGGAA GTGGTGCACATCGGTAAACAGATGCTGATGACGCGCGGTTCCCTGACCACTTTCAGTATCGCCAACGACGTGGCGAAATA TTTCGCCATTATTCCGGCGGCGTTTGCGGCGACCTATCCGCAGCTCAACATGCTGAACGTGATGCAGCTGCACTCGCCCG CCAGCGCAATTCTGTCAGCGGTGATCTTTAACGCCCTGGTGATTATCTTCCTGATCCCGCTGGCCCTGAAAGGCGTCAGC TACCGCCCGCTGAGTGCCGCTGCGCTGCTGCGCCGCAACCTGCTGATTTACGGTCTGGGTGGCCTGCTGGTGCCGTTTGT CGGCATCAAAGCGATCGATCTGCTGTTAGTGCTTTCAGGCATGGCCTGA Protein sequence : MSRQQQALFDAALLRTSAWDAVKKLDPRVQFRNPVMFVVWLGSVLTTLLALAMLFGRISGSASFTGAIALWLWFTVLFAN LAEALAEGRSKAQASSLKGVKKTSFAKKLSAARYGVEWQQVSADALRKGDAVLVEAGDIIPCDGEVMEGGASVDESAITG ESAPVIRESGGDFASVTGGTRILSDWLVITCSANPGETFLDRMIAMVEGAKRRKTPNEIALTILLVSLTIVFLLATVTLW PFSAWGGTPVSITVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLMLDKTGTITLGNRQAT QFLPAPGVSEEQLADAAQLASLADETPEGRSIVVLAKQRFNLRERDLSSMGASFIPFSAQTRMSGVNVQERLIRKGAVDA VRRHIEANHGRFPAEVNAQVEEVARSGGTPLVVSEGANVLGVVALKDIVKGGIKERFAELRKMGIKTVMITGDNPLTAAA IAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLLE VVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNMLNVMQLHSPASAILSAVIFNALVIIFLIPLALKGVS YRPLSAAALLRRNLLIYGLGGLLVPFVGIKAIDLLLVLSGMA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-175 | 62 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 8e-176 | 62 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 6e-149 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-147 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-147 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-147 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-147 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-147 | 55 |
