|
Name : ltrA (Pvag_2817) Accession : YP_003932422.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : HTH-type transcriptional regulator ltrA Function : - COG functional category : K : Transcription COG ID : COG0583 EC number : - Position : 2995538 - 2996455 bp Length : 918 bp Strand : + Note : transcriptional regulator DNA sequence : ATGGAACGACTGAAAGGTATGTCTGTCTTCGCCAGAGTGGTCGAACTCGGTTCGTTTACTGCGGCGGCGCGTCAGCTCCA TCTGAGCGTCTCATCCATCAGCCAGATCGTCGCAAAACTGGAGGATGCATTGCAGGTTAAGCTGCTGAATCGCAGTACCC GCAGTATCGGGCTGACCGAGGCGGGTAAAATCTATTATCAGGGCTGCCGACGTATGCTGGCGGAAGCGACGCAGGTGCAT GAACAGCTCTACGCGTTTAACAATACGCCGATTGGCGTGTTGCGCATTGGCAGCTCCTCGACCATGGCGCAGAATGTGTT AGCCGGTATGACCAGCGATATGCTGCGGGAGTATCCGGGGCTAAGTGTGAACCTGGTTACTGGCGTTCCGGCCCCGGATT TGATTGCGGATGGTCTGGATCTGGTGATTCGGGTGGGCGCATTAAAAGATTCCAGCCTCTTTTCGCGTCGTCTTGGCGCG ATGCCGATGGTGGTATGCGCCGCAAAAAGCTATCTGGCCCAGCACGGCACGCCGGAGAAGCCGGGCGATATCGATAATTT TTCCTGGCTGGAATATAGCGTACGGCCCGACAACAATTTTGAGCTGATTGCACCAGAAGGCTTAGTCACCCGCCTCGCGC CACAGGGGCGTTTCGTGACCAACGATTCGCTGACGCTGATTCGCTGGCTCAAGTCGGGCAATGGCATCGCCTATGTGCCG ATGATGTGGGTGATTGATGAGATCACCGCAGGCGAGATCGATATTCTGTTTCCGCACTATCAGTCCGACCCGCGTCCGGT GTATGCGCTCTACACCGAGAAGGATAAACTGCCGCTGAAGGTGCAGGTCTGCATCGATTATCTGACCGACTATTTTGAAC AGGTGGCTGAACAGTATCAGCAGCACCGTAAAAGCTAA Protein sequence : MERLKGMSVFARVVELGSFTAAARQLHLSVSSISQIVAKLEDALQVKLLNRSTRSIGLTEAGKIYYQGCRRMLAEATQVH EQLYAFNNTPIGVLRIGSSSTMAQNVLAGMTSDMLREYPGLSVNLVTGVPAPDLIADGLDLVIRVGALKDSSLFSRRLGA MPMVVCAAKSYLAQHGTPEKPGDIDNFSWLEYSVRPDNNFELIAPEGLVTRLAPQGRFVTNDSLTLIRWLKSGNGIAYVP MMWVIDEITAGEIDILFPHYQSDPRPVYALYTEKDKLPLKVQVCIDYLTDYFEQVAEQYQQHRKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcaR1 | CAI77370.1 | putative lysR-family transcriptional regulator | Not tested | tc-PAIYe | Protein | 4e-122 | 81 |
