Gene Information

Name : Pvag_2705 (Pvag_2705)
Accession : YP_003932313.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 2880730 - 2881761 bp
Length : 1032 bp
Strand : +
Note : Bacteriophage capsid portal protein

DNA sequence :
ATGAGCAAACGCAGGAACCGCGCCCGCACGCAGCCCGTGCCGCAGCCGGATAACATGACCAGCGGAGCAGCGTCGGAGGC
GTTTACCTTTGGCGACCCGATCCCGGTGCTGGACCGCCGCGAACTGCTGGACTACGTGGAGTGCGTTATCAATGATCGCT
GGTATGAACCGCCCGTAAGCGTTGACGGGCTGGCGCGCACGTTCCGCGCCGCCGTGCATCACAGCTCGCCCATCAGCGTG
AAGTGCAATATTCTGGCGAGTACCTTTATCCCGCACCGCCTGCTGAGTCAGCAGGCGTTCAGCCGCTTTGCACTGGATTA
CCTGATTTTCGGCAATGCCTACCTGGAGAAGCGGACCAGCCGCCTCGGTAACGTGCTGAAGCTGGAGCCGTCGCTGGCGA
AATTCACCCGGCGCGGCCTCGACCTGGACACCTACTGGTATGCGCACTATGGCATTAACACGGAACCGTATGAGTTTGCG
AAGGGCAGCGTGTTTCACCTGATGGAGCCGGACATTAATCAGGAGATTTACGGCCTGCCGGGCTACTTGTCTGCCATCCC
GTCGGCGCTGCTTAACGAGTCGGCTACGCTGTTCCGTCGCAAGTATTACCTTAACGGCAGCCATGCGGGTTTCATCATGT
ACATGACCGACCCGGCGCAGAGTCAGCAGGACGTGGACAATATCCGCGGTGCCATGAAAAGCGCAAAGGGGCCGGGCAAC
TTCCGCAACCTGTTTATGTACAGCCCGAACGGGAAAAAGGACGGCATCCAGATCATCCCGCTGTCAGAGGTGGCGGCGAA
GGATGAGTTTCTGAACATCAAAAACGTAAGCCGTGACGACATGCTGGCCGTGCATCGTGTGCCGCCGCAGCTGATGGGGA
TCATCCCGAATAATACCGGTGGATTTGGCGATGTCGAAAAGGCAAGTAAAGTATTTGTTCGCAACGAACTGATACCTCTT
CAAAAAAGATTACAAGAAATAAACAACTGGGTTAGCGAAGAAGTAATAAATTTTGAGCCTTATCATCTATGA

Protein sequence :
MSKRRNRARTQPVPQPDNMTSGAASEAFTFGDPIPVLDRRELLDYVECVINDRWYEPPVSVDGLARTFRAAVHHSSPISV
KCNILASTFIPHRLLSQQAFSRFALDYLIFGNAYLEKRTSRLGNVLKLEPSLAKFTRRGLDLDTYWYAHYGINTEPYEFA
KGSVFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRRKYYLNGSHAGFIMYMTDPAQSQQDVDNIRGAMKSAKGPGN
FRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMLAVHRVPPQLMGIIPNNTGGFGDVEKASKVFVRNELIPL
QKRLQEINNWVSEEVINFEPYHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 2e-138 79
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 2e-138 79
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 9e-95 57