Gene Information

Name : n3 (Pvag_2698)
Accession : YP_003932306.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : Capsid proteins
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2874224 - 2875225 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAATACTACCCGTTTTAAGCTGAATGCTTACATGTCAGTGCTGGCAGAAATCAACAAGATTGACCTGTCCGCGCT
GAACAGCAAATTCACCATTGAGCCGTCCGTGTCGCAGACGCTGGAAAGCAAAATTCAGGAGTCGTCCGCGTTCCTGCAGG
CCATCAACATCATGCCGGTCAGTGAGCAGAGCGGCGAACGGCTGGGGCTGGGGATCGGGACTACGATTGCGGGCACCACC
GACACCACCCAGAAAGAGCGCGAGCCGACCGATCCGACCTACATCGACGGCGACGGCTATAAATGCACGCAGACCAACTT
TGACACGGCGCTGCCTTATTCAAAGCTGGACATGTGGGCGAAGTTCAGCGATTTCCAGGTGCGCATCCGTGACGCCATCG
TGAAGCGTCAGGCGCTGGACCGCATCATGATCGGCTTCAACGGCCTGAAGCGTGAGAAAACCTCCAACCGCGTACAGAAC
CCGCTGCTGCAGGACGTGAATATCGGCTGGCTGGAAAAAATCCGCCAGGAAAAACCGGCGCAGGTGCTGGGTCAGCACAT
CGGTGACGACGGCAAGGTGGTGTCGGACAAAATCACCGTGGGCAAAAGCGGCCTGTTCCGTAACCTGGACGCCGTGGTGA
TGGGCGCGGTGTCGGAAAAAATCGGCGTTCAGTATCAGGACGACACCGAACTGGTGGTGATCTGCGGACGCCAGCTGCTG
GCTGATAAGTATTTCCCGCTGGTCAATCAGAGCCAGCCCAACACCGAAGCGCTGGCCGCTGATCTGATCATCAGCCAGAA
GCGCATCGGCGGCCTGCAGGCGGTCCGTGCCCCGTACTTCCCGGCGAATGCGCTGCTGATCACCCGCCTGGATGGGCGAT
GCCGCTGGGAAGCCGCACCACGGCGACGGTGCTGGCCGAAGAAATTGCCGACGCGGCGAAGGCCGCCATGCTGGCGAAGA
CGCCTTTTGATCCGGCCCTGCTGCTGGAGGCGCTGGAGGTAG

Protein sequence :
MKNTTRFKLNAYMSVLAEINKIDLSALNSKFTIEPSVSQTLESKIQESSAFLQAINIMPVSEQSGERLGLGIGTTIAGTT
DTTQKEREPTDPTYIDGDGYKCTQTNFDTALPYSKLDMWAKFSDFQVRIRDAIVKRQALDRIMIGFNGLKREKTSNRVQN
PLLQDVNIGWLEKIRQEKPAQVLGQHIGDDGKVVSDKITVGKSGLFRNLDAVVMGAVSEKIGVQYQDDTELVVICGRQLL
ADKYFPLVNQSQPNTEALAADLIISQKRIGGLQAVRAPYFPANALLITRLDGRCRWEAAPRRRCWPKKLPTRRRPPCWRR
RLLIRPCCWRRWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 5e-92 67
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 5e-92 67
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 1e-55 49