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Name : lysS (Pvag_2514) Accession : YP_003932124.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2685300 - 2686820 bp Length : 1521 bp Strand : - Note : Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCTGAACAACAACCGCAGAGCGCTGATGCCGCCGTTGAGTTAAATAACGAACTGAAAACGCGCCGTGAAAAGCTGAG CGCGCTGCGTGCCAACGGTCTGGCGTTTCCCAACGATTTCCGTCGTGACAGCCTTTCGAACCAGCTGCTGGAAAGCTATG GCGAGAAGAGCAACGAAGAGCTGGAAGCGCTGGGTATCGAAGTCAGCGTCGCTGGCCGCATGATGACCCGCCGTATCATG GGTAAAGCCTCTTTCGTCACCCTGCAGGATGTGGGCGGCCGGATTCAGCTTTACGTTTCACGTGACGATCTGGCGGAAGG CATCTACAACGAGCAGTTTAAGAAATGGGACCTCGGCGATATCCTGGGTGCGCGTGGCAAACTGTTCAGAACCAAGACCG GCGAACTGTCGATTCACTGTTCAGAACTGCGTCTGCTGACCAAAGCACTGCGCCCGCTGCCGGATAAGTTCCACGGCCTG GCCGATCAGGAAACCCGTTACCGTCAGCGTTACCTTGATCTGATCGCCAACGAAGAGTCTCGCAACACCTTCAAAATTCG TTCGCAGATCATGGCCGGTATTCGCCAGTTCATGGTGGGCCGCGACTTTATGGAAGTGGAAACCCCGATGATGCAGGTGA TCCCGGGCGGTGCCTCTGCGCGTCCGTTTATCACCCATCACAATGCGCTGGATATCGACATGTATCTGCGTATTGCGCCA GAGCTCTACCTGAAGCGTCTGGTGGTGGGCGGCTTCGATCGCGTATTCGAGATCAACCGTAACTTCCGTAACGAAGGTAT TTCGCCACGTCATAACCCAGAGTTCACCATGATGGAACTCTATATGGCTTATGCGGATTACAAAGATCTGATCGAGCTGA CCGAAAGCCTGTTCCGTACGCTGGCGCAGGATGTGCTGGGCAGCACGGTTGTGCCTTACGGCGAGCAGGAGTTTGATTTC GGCAAGCCGTTTGAAAAACTGACCATGCGTGAAGCGATTAAGAAATACCGTCCGGAAACGGATCTGGCCGATCTGGAAGA CTTCGACAAAGCCGTGGCGATTGCACAATCCCTGCACATCAAAGTAGAGAAGAGCTGGGGTCTGGGCCGCGTCGTGACCG AGATCTTCGAAGAGACGGCAGAAGCGCATCTGATTCAGCCAACCTTCATTACCGAATATCCGGCTGAAGTCTCTCCGCTG GCCCGCCGTAATGACGAGAACCCGGAAATCACCGATCGCTTTGAGTTCTTCATTGGTGGTCGTGAAATCGGCAACGGCTT CTCCGAGCTGAACGATGCAGAAGATCAGGCTGAGCGTTTCCTGCAGCAGGTGAATGCCAAAGATGCGGGTGACGACGAAG CGATGTTCTACGACGAAGACTATGTCACCGCACTGGAACACGGTCTGCCGCCAACCGCGGGTCTGGGCATCGGTATTGAC CGTATGGTGATGCTGTTTACCAACAGCCACACTATCCGTGATGTGATCCTGTTCCCGGCATTGCGTCCAGGCAGCAAGTA A Protein sequence : MSEQQPQSADAAVELNNELKTRREKLSALRANGLAFPNDFRRDSLSNQLLESYGEKSNEELEALGIEVSVAGRMMTRRIM GKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLFRTKTGELSIHCSELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANEESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGSTVVPYGEQEFDF GKPFEKLTMREAIKKYRPETDLADLEDFDKAVAIAQSLHIKVEKSWGLGRVVTEIFEETAEAHLIQPTFITEYPAEVSPL ARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPALRPGSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-169 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003932124.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-169 | 68 |
