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Name : clpB (Pvag_2377) Accession : YP_003931994.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Virulence Product : chaperone protein clpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2531999 - 2534572 bp Length : 2574 bp Strand : - Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGCGTCTGGATCGTCTTACTAACAAATTTCAGCTGGCTCTCGCCGACGCGCAGTCCCTGGCTCTGGGACACGACAACCA ATTCATTGAACCTCTGCACCTGATGAGCGCGTTGCTCAAACAGGAAGGCGGATCGGTTTCACCTTTACTGACTTCTGCGG GTGTCAACGTTACCCCCTTACGCGTTCAGGTTGAGCAGGCCATCGATCGCCTGCCACAAGTTGAAGGCAGCGAAGGGGAT GTACAACCCTCATCTGACCTCGTCCGGGTATTAAACCTGTGTGACAAGCTGGCGCAGAAGCGCAACGATAACTTTATTTC ATCCGAATTATTTGTTCTGGCCGCCCTTGAATCTCGTGGTTCACTGGCCGATCTACTTAAAGCAGCGGGCGCAACGCGCG AAAAAATCACCAGTGCGATTGAACAGATGCGGGGAGGAGACAACGTGAACGATCAGGGGGCTGAAGATCAGCGCCAGGCA TTGAAGAAATACACTATTGATCTGACCGAGCGTGCCGAGAAGGGCAAACTCGATCCGGTCATCGGCCGCGACGAAGAGAT TCGCCGCACCATTCAGGTTCTGCAGCGCCGTACTAAAAATAACCCGGTGCTGATTGGTGAGCCTGGCGTGGGTAAAACCG CGATTGTCGAAGGGCTGGCGCAGCGCATCATTAACGGCGAAGTCCCTGAAGGTCTGAAAGGCCGCAGGGTACTGGCGCTG GATATGGGTGCGCTTGTAGCCGGGGCGAAATATCGCGGTGAATTCGAAGAGCGTCTGAAAGGCGTGCTGAGTGACCTGTC GAAACAGGAAGGCAACGTCATTCTGTTTATTGACGAACTGCACACTATGGTAGGCGCCGGTAAAGCGGACGGTGCAATGG ACGCCGGTAACATGCTTAAGCCTGCGCTGGCGCGTGGTGAACTGCACTGCGTGGGCGCCACCACACTTGATGAGTACCGT CAGTACATTGAAAAAGATGCTGCGCTGGAGCGTCGTTTCCAGAAAGTCTTTGTGGCTGAGCCGAGTGTGGAAGACACCAT CGCTATTCTGCGTGGCCTGAAAGAGCGTTACGAACTGCATCACCATGTGCAGATTACTGACCCGGCGATTGTCGCAGCGG CGACGCTGTCTCATCGTTACATTGCTGATCGCCAGTTGCCGGATAAAGCGATTGACCTGATTGATGAGGCGGCATCCAGC ATTCGTATGCAGATGGACTCGAAGCCGGAGTCACTGGATCGTCTTGAGCGCCGCATCATTCAGCTGAAGCTGGAGCAGCA GGCGCTGAAGAAAGAGGCGGATGATGCCAGTATCAAACGTCTGGAGATGCTGGAAACTGAGCTGAACCAGAAAGAGCGCG AATATGCCGAGCTGGAAGATGAGTGGAAGACCGAGAAAGCCTCGCTGTCGGGCACGCAGAATATTAAAGCTGAACTTGAG CAGGCGCGTCTGAACTTAGAGCAGGCTCGTCGTCAGGGCGATCTCGCTCAGATGTCAGAACTGCAGTACGGTAAAATTCC GGAACTGGAAAAACAGCTAGCCGCAGCGACCCAGGCGGAAGGCAAAACCATGAAGTTACTGCGCAACCGTGTAACGGATG TGGAGATTGCGGATGTGCTGGCGCGCTGGACCGGTATCCCGGTGGCGCGAATGATGGAAGGTGAGCGCGATAAGTTACTG CGCATGGAACAGGATCTGCACGGCCGGGTCATCGGACAGGATGAAGCGGTTGAAGCGGTATCCAATGCCATCCGCCGTAG TCGCGCTGGCCTGTCAGATCCTAACCGGCCAATTGGTTCCTTCCTGTTCCTGGGACCTACCGGGGTAGGTAAGACCGAAC TGTGTAAATCGCTGGCTAACTTCCTGTTCGACAGTGACGATGCGATGGTGCGTATCGACATGTCCGAATTTATGGAAAAA CATTCGGTGTCGCGGCTGGTGGGCGCACCTCCGGGCTATGTCGGCTATGAAGAGGGCGGTTATCTGACCGAAGCGGTACG TCGTCGTCCTTATTCGGTCATTCTGCTGGATGAAGTTGAGAAGGCGCATCCTGATGTCTTCAACATTCTGCTGCAGGTGC TGGATGATGGGCGTCTGACGGATGGGCAGGGTCGTACGGTCGACTTCCGTAACAGTGTGGTGATCATGACCTCTAACCTG GGATCAGATTTAATCCAGGAACGGTTCGGCAATCTCAGCTACCCGGAAATGAAAGATATTGTGATGGGTGTGGTCGGACA GCATTTCCGTCCGGAATTCGTCAACCGTATTGATGAAGTGGTCGTCTTCCATCCGCTGGCAGAAAAACACATTGCGTCTA TTGCGCAGATTCAGCTGCAGCGGTTGTATAAACGTCTGGATGAACGTGGTTATCAGCTGCACATCTCTGAGGATGCGATC AAACTGCTTGCCGAGAACGGATATGATCCGGTCTATGGTGCACGACCTCTCAAACGTGCGATACAGCAGCAGATTGAGAA CCCGCTGGCTCAGCAGATCCTTGCCGGTTCGCTGGTGCCAGGCAAAACCATCGAAATGGATGTGGAAAACGACGTCATTA CTGCACATCAGTAA Protein sequence : MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLKQEGGSVSPLLTSAGVNVTPLRVQVEQAIDRLPQVEGSEGD VQPSSDLVRVLNLCDKLAQKRNDNFISSELFVLAALESRGSLADLLKAAGATREKITSAIEQMRGGDNVNDQGAEDQRQA LKKYTIDLTERAEKGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL DMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS IRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIKRLEMLETELNQKEREYAELEDEWKTEKASLSGTQNIKAELE QARLNLEQARRQGDLAQMSELQYGKIPELEKQLAAATQAEGKTMKLLRNRVTDVEIADVLARWTGIPVARMMEGERDKLL RMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNL GSDLIQERFGNLSYPEMKDIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQLHISEDAI KLLAENGYDPVYGARPLKRAIQQQIENPLAQQILAGSLVPGKTIEMDVENDVITAHQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-159 | 45 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-99 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-99 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003931994.1 | chaperone protein clpB | VFG2084 | Protein | 8e-105 | 41 |
