Gene Information

Name : nrdE (Pvag_2359)
Accession : YP_003931981.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 2509168 - 2511306 bp
Length : 2139 bp
Strand : +
Note : ribonucleotide reductase, subunit alpha

DNA sequence :
TTGGCAACAACAGATACCCTCAACGGCGTGACGCTCGATTATCACGCCCTTAATGCCATGCTGAACCTCTATGACGCGGA
TGGCCGCATCCAGTTCGACAAGGATCGCGAAGCGACACGTCAGTTTTATCTGCAGCATGTGCAGCCCAATACGGTTTCCT
TCGCCAGCAACGCTGAGCGTTTACGCTATCTGGTGGCGGAGAGTTATTACGAAGCGGATGTGCTGAACCAGTACGACTTT
GAATTCCTGCTTGCGCTGCATGAGGTGGCGGAGAACCGGGGATTTGAGTTCAAAACCTTTCTGGGTGCCTGGAAGTACTA
CACCAGCTATACGCTGAAGACCTTTGATGGCAAACGCTATCTGGAAACCTTCGAGCAGCGCGCCTGCATGGTGGCGCTGA
CCCTGGCTCAGGGCGATGAAACGCTGGCGCGGGCGCTGCTGGAGGAGATCCTGAGCGGCCGTTTCCAGCCTGCCACACCC
ACCTTTCTGAACTGCGGCAAGCAGCAGCGCGGTGAGCTGGTCTCCTGCTTCCTGCTGCGTATCGAAGACAACATGGAATC
GATTGGTCGCGCCGTGAATTCGGCACTGCAGCTGTCAAAACGGGGCGGCGGCGTCGCCTTTTTACTGTCCAATCTGCGAG
AGTCCGGCGCGCCGATCAAGCGCATAGAAAATCAGTCGTCGGGCGTGATTCCGGTGATGAAAATGCTGGAAGATGCCTTC
TCTTATGCGAATCAGCTTGGCGCACGTCAGGGCGCTGGAGCGGTGTGGCTCAATGCGCACCATCCCGATATCTTCCGCTT
TCTGGATACCAAGCGCGAAAACGCCGACGAGAAGATTCGCATTAAATCGTTGTCGCTGGGCGTGGTAATCCCCGATATCA
CTTTCCAGCTGGCGAAAGAGAATAAACCGATGGCGCTGTTCTCGCCCTACGACGTGGAGCGGATCTACGGTCAGGCCTTT
GGTGATATCAGCATCAGCGAAAAGTATGACGAGATGCTGGCGGACGATCGCATCCGCAAAACCTATATTCAACCGCGTGA
TTTTTTTCAGACGCTGGCCGAAATTCAGTTTGAGTCGGGCTATCCCTACATCATGTATGAGGACAGTGTGAACCGCAGCA
ACCCGATTGCCGGTCGCATCAATATGAGCAACCTCTGCTCTGAGATCCTGCAGGTAAACAGCGCCAGCGAGTACAACGAC
GATCTCAGCTATCGCCGCGTCGGCAAAGATATTTCCTGTAATCTCGGCTCACTGAATATTGCACACGCCATGGATTCGCG
CGATCTGGCGCGCACCGTGGATGTGGCCGTTCGCGCCCTGACGTCGGTATCGATGATGAGCGAGATCGGCTCGGTGCCTT
CCATCGCCGAAGGCAATCGCCGCTCGCACGCCATTGGCCTGGGTCAGATGAACCTGCACGGCTATCTGGCGCGTGAAGGC
ATCGCCTACGGTTCGCCGGAAGCGCTGGATTTCACCAATCTCTACTTCTATTGCATCACCTACTATGCGCTGCGTACCTC
TAATCAGCTGGCGCAGGAGCATCAGCAGACTTTCGACGGCTTTGCGGATTCGGACTACGCCAGCGGCGTTTATTTCGATA
AGTATCTGCAGCGCGCGTGGCTGCCGCGTACTGAACGGGTAGCTCAACTGTTTGCCGATGCCGGACTGACGCTGCCCACG
CAGGCAGACTGGCAGGCGCTGCGTGATGCGGTGATGCAGCACGGGTTGTTTAATCAGAACCTGCAGGCGATCCCGCCGAC
CGGTTCTATCTCCTACATCAACCACGCCACCTCCAGCATCCATCCGATTGTCTCCCCTATCGAGATCCGCAAAGAGGGCA
AAACCGGCCGCGTCTACTATCCCGCGCCATTTATGACCAATGAGAATCTTCACCTCTATCAGGATGCGTATCAGATTGGG
CCGGAAGCGATTATTGATACCTATGCAGAAGCAACGCAGCACGTCGATCAGGGCCTGTCGCTGACGCTGTTCTTCCGCGA
TGACGTCACCACCCGTGACATCAACAAAGCGCAGATTTACGCGTGGAAAAAAGGCATCAAAACGCTCTATTACATTCGAC
TGCGTCAGATGGCGCTTCAGGGCACGGAGGTTCAGGGCTGCGTCTCATGCTCCCTGTAA

Protein sequence :
MATTDTLNGVTLDYHALNAMLNLYDADGRIQFDKDREATRQFYLQHVQPNTVSFASNAERLRYLVAESYYEADVLNQYDF
EFLLALHEVAENRGFEFKTFLGAWKYYTSYTLKTFDGKRYLETFEQRACMVALTLAQGDETLARALLEEILSGRFQPATP
TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRESGAPIKRIENQSSGVIPVMKMLEDAF
SYANQLGARQGAGAVWLNAHHPDIFRFLDTKRENADEKIRIKSLSLGVVIPDITFQLAKENKPMALFSPYDVERIYGQAF
GDISISEKYDEMLADDRIRKTYIQPRDFFQTLAEIQFESGYPYIMYEDSVNRSNPIAGRINMSNLCSEILQVNSASEYND
DLSYRRVGKDISCNLGSLNIAHAMDSRDLARTVDVAVRALTSVSMMSEIGSVPSIAEGNRRSHAIGLGQMNLHGYLAREG
IAYGSPEALDFTNLYFYCITYYALRTSNQLAQEHQQTFDGFADSDYASGVYFDKYLQRAWLPRTERVAQLFADAGLTLPT
QADWQALRDAVMQHGLFNQNLQAIPPTGSISYINHATSSIHPIVSPIEIRKEGKTGRVYYPAPFMTNENLHLYQDAYQIG
PEAIIDTYAEATQHVDQGLSLTLFFRDDVTTRDINKAQIYAWKKGIKTLYYIRLRQMALQGTEVQGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 70