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Name : smpB (Pvag_2334) Accession : YP_003931956.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : SsrA-binding protein (Small protein B) Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 2485628 - 2486110 bp Length : 483 bp Strand : + Note : tmRNA-binding protein DNA sequence : ATGACAAAGAAAAAAGCACACAAACCCGGTTCTGCCACTGTTGCCATGAACAAACGCGCCCGCCACGAGTACTTCATTGA AGAGGAGTATGAAGCGGGATTGTCGTTACAAGGATGGGAAGTTAAGTCACTTCGTGCCGGTAAAGCCAACATCAGCGACA GCTATATTCTGCTGCGCGATGGCGAAGCCTTTCTGTTCGGTTCAACCTTTCAACCCTTAGCCGTTGCCTCCAGCCACGTG GTCTGTGACCCAACGCGCAGCCGTAAGCTGCTGCTGAAGCAACGTGAACTCGACTCCCTGTATGGCCGCGTTAACCGCGA AGGCTACACCATCGTGGCACTGTCGCTGTACTGGAAGAATGCCTGGTGCAAACTGAAGATTGGTGTTGCACGCGGTAAGA AAGAGCACGACAAGCGCGACGATATCAAAGACCGCGAATGGCAGTTAGACAAAGCACGTATCATGAAGAATTCAAAGCGT TAA Protein sequence : MTKKKAHKPGSATVAMNKRARHEYFIEEEYEAGLSLQGWEVKSLRAGKANISDSYILLRDGEAFLFGSTFQPLAVASSHV VCDPTRSRKLLLKQRELDSLYGRVNREGYTIVALSLYWKNAWCKLKIGVARGKKEHDKRDDIKDREWQLDKARIMKNSKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-50 | 66 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 7e-24 | 46 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-18 | 44 |
