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Name : gabd1 (Pvag_1891) Accession : YP_003931525.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1978229 - 1979686 bp Length : 1458 bp Strand : - Note : NAD-dependent aldehyde dehydrogenases DNA sequence : ATGTCGCGATTACAACTTAAAGACAGCGATCTGCTGCGCCAGCAGGCGTTATTTGCCGGACGCTGGCAGGATGCACATCA GGGTGCCACGCTGCCGGTTACCGATCCTGCCACGGGCGAAACGCTGGCGACCATACCGGCGCTGGGCCGTGCGGAAACAG AGCAGGCGATAGCCTATGCGGAAACGGTTCGCATCAGCTGGGGAAAAACCACTAACGCCAGCCGTGCCGCGCTGCTGGAA AAATGGCATCAACTGATTATTGAACATGCTGACGACCTGGCGATCATCATGACCGCAGAGCAGGGCAAACCGCTGGCGGA AGCCAGAGGCGAAGTGCTCTACGGGGCCAGCTTTGTGAAATGGTTCGCGGAAGAGGCGCGCCGTGTCTATGGCGACACCA TTCCCGCGCCCAGCGATGACCGGCGCATTCTGGTGCTGAAACAGCCGGTAGGCGTTGCCGCCGCCATCACTCCCTGGAAC TTCCCGATTGCGATGATCACCCGTAAGGTGGCCCCCGCGCTGGCCGCCGGATGCCCGATTATCGTCAAACCCTCTGAATT AACGCCGCTCTCTGCGCTGGCCCTCGCGGTGCTGGCAGAACGTGCCGGTTTCCCGTCAGGTGTGTTACAGGTGCTGACCG GCCTGCCCATAGAGATTGGCGCGGCACTGACTGGTAGCCGTACGGTGCGTAAAATCTCCTTCACCGGCTCAACCCGCATT GGGCAGTTATTGATGCAGCAGAGCGCTGACAGCATCAAACGTCTGAGCCTGGAGCTGGGCGGCAACGCGCCGCTGATCGT GTTCGATGATGCCGACATTGAGATTGCGGTCGCGGGCGTCATGCTCAGCAAGTTCCGCAACGCCGGGCAGACCTGCGTCT GCGCCAACCGCATCCTGGTGCAGCGCAACATCTATCCACGCTTCACCGCGCGACTGCTGGAGGCGGTCGCCACCCTGAAG GTGGGTGATGGCTTTGCGCACGACAGCACCATGGGTCCGCTGATTAACCCACGCGCGGTAGAGAAGGTGAATGGTCACAT CGATGATGCGCTCAGCCAGGGTGCCACGCTGCTGACCGGCGGCATCAGCCAGGATAATGGTACTTTTGTTCAACCTACGG TGCTCGGCGAGGTCACGTCCAGCATGCGCATTGCTCATGAGGAGACATTCGGTCCGGTCGCGCCGCTGTTTATCTTTGAT GATGAGGATGAGGCCATCGCAATGGCGAATGACACGCCCTACGGACTGGGCGCCTACTTCTTTACCGAAAATATCCGGCG TGCCTGGCGGGTGGCGGAAGCGTTGGAGTTTGGCATGGTCGGCTTTAATACCGGCGCGATTTCTCTTGAAGTTGCCCCCT TTGGAGGCGTGAAACTTTCCGGTATTGGCCGGGAAGGATCCCGCTACGGAATGGATGAATATCTGGAACAGAAAACTTTT CACATTGGCAGTCTGTAA Protein sequence : MSRLQLKDSDLLRQQALFAGRWQDAHQGATLPVTDPATGETLATIPALGRAETEQAIAYAETVRISWGKTTNASRAALLE KWHQLIIEHADDLAIIMTAEQGKPLAEARGEVLYGASFVKWFAEEARRVYGDTIPAPSDDRRILVLKQPVGVAAAITPWN FPIAMITRKVAPALAAGCPIIVKPSELTPLSALALAVLAERAGFPSGVLQVLTGLPIEIGAALTGSRTVRKISFTGSTRI GQLLMQQSADSIKRLSLELGGNAPLIVFDDADIEIAVAGVMLSKFRNAGQTCVCANRILVQRNIYPRFTARLLEAVATLK VGDGFAHDSTMGPLINPRAVEKVNGHIDDALSQGATLLTGGISQDNGTFVQPTVLGEVTSSMRIAHEETFGPVAPLFIFD DEDEAIAMANDTPYGLGAYFFTENIRRAWRVAEALEFGMVGFNTGAISLEVAPFGGVKLSGIGREGSRYGMDEYLEQKTF HIGSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-134 | 60 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-85 | 43 |
